v12 Core collection, Superclass {7}: beta-Hairpin exposed by an alpha/beta-scaffold
| Motif | LOGO | Gene (human) | Gene synonyms (human) | Gene (mouse) | Gene synonyms (mouse) | Motif length | Quality | Motif subtype | Consensus | Data sources | Aligned words | TF superclass | TF class | TF family | TF subfamily | TFClass ID | HGNC | MGI | EntrezGene (human) | EntrezGene (mouse) | UniProt ID (human) | UniProt ID (mouse) | UniProt AC (human) | UniProt AC (mouse) | GRECO-DB-TF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GCM1.H12CORE.0.S.B |  |
GCM1 (GeneCards) |
GCMA | Gcm1 | Gcma | 11 | B | 0 | nhRCCCGCAYn | S | 7686 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | GCM domain factors {7.2} (TFClass) | GCM {7.2.1} (TFClass) | {7.2.1.0} (TFClass) | TFClass: 7.2.1.0.1 | HGNC:4197 | MGI:108045 | GeneID:8521 (SSTAR profile) |
GeneID:14531 (SSTAR profile) |
GCM1_HUMAN | GCM1_MOUSE | Q9NP62 (TFClass) |
P70348 (TFClass) |
yes |
| GCM2.H12CORE.0.SM.B |  |
GCM2 (GeneCards) |
GCMB | Gcm2 | Gcmb | 10 | B | 0 | nRCCCGCATn | S+M | 6405 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | GCM domain factors {7.2} (TFClass) | GCM {7.2.1} (TFClass) | {7.2.1.0} (TFClass) | TFClass: 7.2.1.0.2 | HGNC:4198 | MGI:1861438 | GeneID:9247 (SSTAR profile) |
GeneID:107889 (SSTAR profile) |
GCM2_HUMAN | GCM2_MOUSE | O75603 (TFClass) |
O09102 (TFClass) |
yes |
| NFIA.H12CORE.0.P.B |  |
NFIA (GeneCards) |
KIAA1439 | Nfia | 8 | B | 0 | bYTGGCWv | P | 983 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.1 | HGNC:7784 | MGI:108056 | GeneID:4774 (SSTAR profile) |
GeneID:18027 (SSTAR profile) |
NFIA_HUMAN | NFIA_MOUSE | Q12857 (TFClass) |
Q02780 (TFClass) |
yes | |
| NFIA.H12CORE.1.PS.A |  |
NFIA (GeneCards) |
KIAA1439 | Nfia | 20 | A | 1 | nnTTGGCACGdTGCCAAvdn | P+S | 361 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.1 | HGNC:7784 | MGI:108056 | GeneID:4774 (SSTAR profile) |
GeneID:18027 (SSTAR profile) |
NFIA_HUMAN | NFIA_MOUSE | Q12857 (TFClass) |
Q02780 (TFClass) |
yes | |
| NFIB.H12CORE.0.PSM.A |  |
NFIB (GeneCards) |
Nfib | 20 | A | 0 | dnYTGGCWnMdWGCCAAnnn | P+S+M | 2452 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.2 | HGNC:7785 | MGI:103188 | GeneID:4781 (SSTAR profile) |
GeneID:18028 (SSTAR profile) |
NFIB_HUMAN | NFIB_MOUSE | O00712 (TFClass) |
P97863 (TFClass) |
yes | ||
| NFIB.H12CORE.1.PS.A |  |
NFIB (GeneCards) |
Nfib | 9 | A | 1 | nWGCCARvh | P+S | 992 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.2 | HGNC:7785 | MGI:103188 | GeneID:4781 (SSTAR profile) |
GeneID:18028 (SSTAR profile) |
NFIB_HUMAN | NFIB_MOUSE | O00712 (TFClass) |
P97863 (TFClass) |
yes | ||
| NFIC.H12CORE.0.PSM.A |  |
NFIC (GeneCards) |
NFI | Nfic | 17 | A | 0 | nYTGGCdnCdhGCCARn | P+S+M | 2386 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.3 | HGNC:7786 | MGI:109591 | GeneID:4782 (SSTAR profile) |
GeneID:18029 (SSTAR profile) |
NFIC_HUMAN | NFIC_MOUSE | P08651 (TFClass) |
P70255 (TFClass) |
yes | |
| NFIC.H12CORE.1.PSM.A |  |
NFIC (GeneCards) |
NFI | Nfic | 8 | A | 1 | nWGCCARv | P+S+M | 999 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.3 | HGNC:7786 | MGI:109591 | GeneID:4782 (SSTAR profile) |
GeneID:18029 (SSTAR profile) |
NFIC_HUMAN | NFIC_MOUSE | P08651 (TFClass) |
P70255 (TFClass) |
yes | |
| NFIX.H12CORE.0.SM.B |  |
NFIX (GeneCards) |
Nfix | 17 | B | 0 | nYTGGCdnCdhGCCARn | S+M | 9985 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.4 | HGNC:7788 | MGI:97311 | GeneID:4784 (SSTAR profile) |
GeneID:18032 (SSTAR profile) |
NFIX_HUMAN | NFIX_MOUSE | Q14938 (TFClass) |
P70257 (TFClass) |
yes | ||
| NFIX.H12CORE.1.S.B |  |
NFIX (GeneCards) |
Nfix | 8 | B | 1 | dYGCCAAn | S | 7712 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | NF-1 {7.1.2} (TFClass) | {7.1.2.0} (TFClass) | TFClass: 7.1.2.0.4 | HGNC:7788 | MGI:97311 | GeneID:4784 (SSTAR profile) |
GeneID:18032 (SSTAR profile) |
NFIX_HUMAN | NFIX_MOUSE | Q14938 (TFClass) |
P70257 (TFClass) |
yes | ||
| SMAD2.H12CORE.0.P.B |  |
SMAD2 (GeneCards) |
MADH2, MADR2 | Smad2 | Madh2, Madr2 | 12 | B | 0 | WGTCTSdMWSYh | P | 367 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | R-MAD {7.1.1.1} (TFClass) | TFClass: 7.1.1.1.2 | HGNC:6768 | MGI:108051 | GeneID:4087 (SSTAR profile) |
GeneID:17126 (SSTAR profile) |
SMAD2_HUMAN | SMAD2_MOUSE | Q15796 (TFClass) |
Q62432 (TFClass) |
yes |
| SMAD2.H12CORE.1.P.B |  |
SMAD2 (GeneCards) |
MADH2, MADR2 | Smad2 | Madh2, Madr2 | 10 | B | 1 | bYTGTCTGbv | P | 1000 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | R-MAD {7.1.1.1} (TFClass) | TFClass: 7.1.1.1.2 | HGNC:6768 | MGI:108051 | GeneID:4087 (SSTAR profile) |
GeneID:17126 (SSTAR profile) |
SMAD2_HUMAN | SMAD2_MOUSE | Q15796 (TFClass) |
Q62432 (TFClass) |
yes |
| SMAD3.H12CORE.0.S.B |  |
SMAD3 (GeneCards) |
MADH3 | Smad3 | Madh3 | 11 | B | 0 | RWCTAGACAbn | S | 6936 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | R-MAD {7.1.1.1} (TFClass) | TFClass: 7.1.1.1.3 | HGNC:6769 | MGI:1201674 | GeneID:4088 (SSTAR profile) |
GeneID:17127 (SSTAR profile) |
SMAD3_HUMAN | SMAD3_MOUSE | P84022 (TFClass) |
Q8BUN5 (TFClass) |
yes |
| SMAD3.H12CORE.1.P.B |  |
SMAD3 (GeneCards) |
MADH3 | Smad3 | Madh3 | 9 | B | 1 | bSCAGACAb | P | 1000 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | R-MAD {7.1.1.1} (TFClass) | TFClass: 7.1.1.1.3 | HGNC:6769 | MGI:1201674 | GeneID:4088 (SSTAR profile) |
GeneID:17127 (SSTAR profile) |
SMAD3_HUMAN | SMAD3_MOUSE | P84022 (TFClass) |
Q8BUN5 (TFClass) |
yes |
| SMAD3.H12CORE.2.P.C |  |
SMAD3 (GeneCards) |
MADH3 | Smad3 | Madh3 | 14 | C | 2 | vWRSWGnSAGMSWv | P | 1027 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | R-MAD {7.1.1.1} (TFClass) | TFClass: 7.1.1.1.3 | HGNC:6769 | MGI:1201674 | GeneID:4088 (SSTAR profile) |
GeneID:17127 (SSTAR profile) |
SMAD3_HUMAN | SMAD3_MOUSE | P84022 (TFClass) |
Q8BUN5 (TFClass) |
yes |
| SMAD4.H12CORE.0.P.B |  |
SMAD4 (GeneCards) |
DPC4, MADH4 | Smad4 | Dpc4, Madh4 | 8 | B | 0 | YGKCTGbv | P | 1002 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | Co-SMAD {7.1.1.2} (TFClass) | TFClass: 7.1.1.2.1 | HGNC:6770 | MGI:894293 | GeneID:4089 (SSTAR profile) |
GeneID:17128 (SSTAR profile) |
SMAD4_HUMAN | SMAD4_MOUSE | Q13485 (TFClass) |
P97471 (TFClass) |
yes |
| SMAD4.H12CORE.1.P.B |  |
SMAD4 (GeneCards) |
DPC4, MADH4 | Smad4 | Dpc4, Madh4 | 13 | B | 1 | vWGKCTSdCWSYh | P | 1021 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | Co-SMAD {7.1.1.2} (TFClass) | TFClass: 7.1.1.2.1 | HGNC:6770 | MGI:894293 | GeneID:4089 (SSTAR profile) |
GeneID:17128 (SSTAR profile) |
SMAD4_HUMAN | SMAD4_MOUSE | Q13485 (TFClass) |
P97471 (TFClass) |
yes |
| SMAD5.H12CORE.0.M.C |  |
SMAD5 (GeneCards) |
MADH5 | Smad5 | Madh5, Msmad5 | 10 | C | 0 | nCGTCTvvhn | M | 5632 | beta-Hairpin exposed by an alpha/beta-scaffold {7} (TFClass) | SMAD/NF-1 DNA-binding domain factors {7.1} (TFClass) | SMAD {7.1.1} (TFClass) | R-MAD {7.1.1.1} (TFClass) | TFClass: 7.1.1.1.4 | HGNC:6771 | MGI:1328787 | GeneID:4090 (SSTAR profile) |
GeneID:17129 (SSTAR profile) |
SMAD5_HUMAN | SMAD5_MOUSE | Q99717 (TFClass) |
P97454 (TFClass) |
yes |