In the CORE collection all motifs are considered quite reliable. C
-quality motifs have only a single supporting experiment but were nonetheless manually curated and benchmarked. Also, in the CORE
collection, there are only a handful of D
-quality motifs representing a few rare subtypes, which were not re-discovered when updating v11 to v12 but kept for consistency.
In the sub-collections, D
quality denotes non-benchmarked motifs, e.g. in the ‘invivo
’ sub-collection the D
quality motifs were not tested on ChIP-Seq data.
Don't hesitate to consult the scheme