v12 Core collection, Subfamily {3.1.3.28}: VSX
| Motif | LOGO | Gene (human) | Gene synonyms (human) | Gene (mouse) | Gene synonyms (mouse) | Motif length | Quality | Motif subtype | Consensus | Data sources | Aligned words | TF superclass | TF class | TF family | TF subfamily | TFClass ID | HGNC | MGI | EntrezGene (human) | EntrezGene (mouse) | UniProt ID (human) | UniProt ID (mouse) | UniProt AC (human) | UniProt AC (mouse) | GRECO-DB-TF |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| VSX1.H12CORE.0.SM.B |  |
VSX1 (GeneCards) |
RINX | Vsx1 | Rinx | 12 | B | 0 | nbTAATTAGCbn | S+M | 8621 | Helix-turn-helix domains {3} (TFClass) | Homeo domain factors {3.1} (TFClass) | Paired-related HD {3.1.3} (TFClass) | VSX {3.1.3.28} (TFClass) | TFClass: 3.1.3.28.1 | HGNC:12723 | MGI:1890816 | GeneID:30813 (SSTAR profile) |
GeneID:114889 (SSTAR profile) |
VSX1_HUMAN | VSX1_MOUSE | Q9NZR4 (TFClass) |
Q91V10 (TFClass) |
yes |
| VSX1.H12CORE.1.SM.B |  |
VSX1 (GeneCards) |
RINX | Vsx1 | Rinx | 17 | B | 1 | nvSTAATTAGYhMWWhd | S+M | 1689 | Helix-turn-helix domains {3} (TFClass) | Homeo domain factors {3.1} (TFClass) | Paired-related HD {3.1.3} (TFClass) | VSX {3.1.3.28} (TFClass) | TFClass: 3.1.3.28.1 | HGNC:12723 | MGI:1890816 | GeneID:30813 (SSTAR profile) |
GeneID:114889 (SSTAR profile) |
VSX1_HUMAN | VSX1_MOUSE | Q9NZR4 (TFClass) |
Q91V10 (TFClass) |
yes |
| VSX2.H12CORE.0.PSM.A |  |
VSX2 (GeneCards) |
CHX10, HOX10 | Vsx2 | Chx10 | 12 | A | 0 | vbTAATTAGChn | P+S+M | 9856 | Helix-turn-helix domains {3} (TFClass) | Homeo domain factors {3.1} (TFClass) | Paired-related HD {3.1.3} (TFClass) | VSX {3.1.3.28} (TFClass) | TFClass: 3.1.3.28.2 | HGNC:1975 | MGI:88401 | GeneID:338917 (SSTAR profile) |
GeneID:12677 (SSTAR profile) |
VSX2_HUMAN | VSX2_MOUSE | P58304 (TFClass) |
Q61412 (TFClass) |
yes |
| VSX2.H12CORE.1.S.B |  |
VSX2 (GeneCards) |
CHX10, HOX10 | Vsx2 | Chx10 | 17 | B | 1 | nvYTAATTAGYhhhhhd | S | 2345 | Helix-turn-helix domains {3} (TFClass) | Homeo domain factors {3.1} (TFClass) | Paired-related HD {3.1.3} (TFClass) | VSX {3.1.3.28} (TFClass) | TFClass: 3.1.3.28.2 | HGNC:1975 | MGI:88401 | GeneID:338917 (SSTAR profile) |
GeneID:12677 (SSTAR profile) |
VSX2_HUMAN | VSX2_MOUSE | P58304 (TFClass) |
Q61412 (TFClass) |
yes |