MotifZSC31.H12INVIVO.1.SM.B
Gene (human)ZSCAN31
(GeneCards)
Gene synonyms (human)ZNF310P, ZNF323
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length20
ConsensusdRhhGCAGGGCARTWAKRhn
GC content56.05%
Information content (bits; total / per base)21.351 / 1.068
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words1901

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.709 0.727 0.667 0.689 0.689 0.704 3.475 3.69 212.721 239.301

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.79 0.794 0.657 0.667 0.586 0.601
best 0.846 0.847 0.691 0.701 0.606 0.623
Methyl HT-SELEX, 1 experiments median 0.846 0.847 0.691 0.701 0.606 0.623
best 0.846 0.847 0.691 0.701 0.606 0.623
Non-Methyl HT-SELEX, 1 experiments median 0.734 0.742 0.623 0.633 0.566 0.579
best 0.734 0.742 0.623 0.633 0.566 0.579
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF24-like {2.3.3.10} (TFClass)
TFClass IDTFClass: 2.3.3.10.7
HGNCHGNC:14097
MGI
EntrezGene (human)GeneID:64288
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZSC31_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96LW9
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
01368.75286.75918.75326.75
02306.75150.751248.75194.75
03764.0490.0314.0333.0
04517.0752.0244.0388.0
0558.05.01826.012.0
0628.01704.0108.061.0
071869.01.026.05.0
08149.06.01743.03.0
094.00.01894.03.0
101.00.01899.01.0
11115.01718.029.039.0
121726.0114.051.010.0
13693.03.01185.020.0
147.047.0204.01643.0
15278.019.0139.01465.0
161780.010.086.025.0
1743.055.0470.01333.0
18262.098.01485.056.0
19324.01058.0142.0377.0
20467.25530.25250.25653.25
PFM
ACGT
010.1940.1510.4830.172
020.1610.0790.6570.102
030.4020.2580.1650.175
040.2720.3960.1280.204
050.0310.0030.9610.006
060.0150.8960.0570.032
070.9830.0010.0140.003
080.0780.0030.9170.002
090.0020.00.9960.002
100.0010.00.9990.001
110.060.9040.0150.021
120.9080.060.0270.005
130.3650.0020.6230.011
140.0040.0250.1070.864
150.1460.010.0730.771
160.9360.0050.0450.013
170.0230.0290.2470.701
180.1380.0520.7810.029
190.170.5570.0750.198
200.2460.2790.1320.344
PWM
ACGT
01-0.253-0.5030.657-0.373
02-0.436-1.140.964-0.886
030.4730.03-0.412-0.354
040.0840.457-0.663-0.202
05-2.075-4.2381.343-3.537
06-2.771.274-1.468-2.026
071.366-5.107-2.84-4.238
08-1.151-4.1031.297-4.581
09-4.395-5.5331.38-4.581
10-5.107-5.5331.382-5.107
11-1.4071.282-2.737-2.457
121.287-1.415-2.2-3.692
130.376-4.5810.911-3.082
14-3.983-2.278-0.841.238
15-0.533-3.129-1.221.123
161.318-3.692-1.692-2.876
17-2.364-2.127-0.0111.029
18-0.592-1.5641.137-2.109
19-0.3810.798-1.199-0.231
20-0.0170.109-0.6380.317
Standard thresholds
P-value Threshold
0.001 -1.04029
0.0005 0.54181
0.0001 3.87636