MotifZSC22.H12INVITRO.0.P.D
Gene (human)ZSCAN22
(GeneCards)
Gene synonyms (human)HKR2, ZNF50
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length17
ConsensusdRnShGAdGGhGGMGGS
GC content67.66%
Information content (bits; total / per base)14.996 / 0.882
Data sourcesChIP-Seq
Aligned words995

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.808 0.864 0.649 0.749 0.885 0.908 4.487 4.856 168.215 228.495
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.70
HGNCHGNC:4929
MGI
EntrezGene (human)GeneID:342945
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZSC22_HUMAN
UniProt ID (mouse)
UniProt AC (human)P10073
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01319.0110.0433.0133.0
02198.0132.0606.059.0
03183.0181.0275.0356.0
04127.0581.0229.058.0
05352.0198.0129.0316.0
0677.07.0910.01.0
07877.017.080.021.0
08144.0106.0431.0314.0
0971.05.0912.07.0
1027.010.0955.03.0
11446.0376.086.087.0
12132.05.0843.015.0
1311.013.0954.017.0
14686.0242.032.035.0
1563.07.0911.014.0
1674.026.0883.012.0
17133.0618.0141.0103.0
PFM
ACGT
010.3210.1110.4350.134
020.1990.1330.6090.059
030.1840.1820.2760.358
040.1280.5840.230.058
050.3540.1990.130.318
060.0770.0070.9150.001
070.8810.0170.080.021
080.1450.1070.4330.316
090.0710.0050.9170.007
100.0270.010.960.003
110.4480.3780.0860.087
120.1330.0050.8470.015
130.0110.0130.9590.017
140.6890.2430.0320.035
150.0630.0070.9160.014
160.0740.0260.8870.012
170.1340.6210.1420.104
PWM
ACGT
010.247-0.8070.551-0.62
02-0.226-0.6280.886-1.417
03-0.304-0.3150.10.356
04-0.6660.844-0.082-1.434
050.345-0.226-0.650.238
06-1.157-3.3571.292-4.521
071.255-2.593-1.12-2.4
08-0.542-0.8440.5470.232
09-1.237-3.6171.294-3.357
10-2.166-3.0621.34-3.97
110.5810.411-1.049-1.038
12-0.628-3.6171.216-2.706
13-2.98-2.8341.339-2.593
141.01-0.027-2.005-1.92
15-1.353-3.3571.293-2.768
16-1.196-2.2011.262-2.904
17-0.620.906-0.562-0.872
Standard thresholds
P-value Threshold
0.001 3.08621
0.0005 4.21566
0.0001 6.58421