| Motif | ZSC21.H12RSNP.0.P.D |
| Gene (human) | ZSCAN21 (GeneCards) |
| Gene synonyms (human) | ZFP38, ZNF38 |
| Gene (mouse) | Zscan21 |
| Gene synonyms (mouse) | Zfp-38, Zfp38, Zipro1, Znf38 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZSC21.H12RSNP.0.P.D |
| Gene (human) | ZSCAN21 (GeneCards) |
| Gene synonyms (human) | ZFP38, ZNF38 |
| Gene (mouse) | Zscan21 |
| Gene synonyms (mouse) | Zfp-38, Zfp38, Zipro1, Znf38 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 11 |
| Consensus | dShMAGYACYb |
| GC content | 52.98% |
| Information content (bits; total / per base) | 9.218 / 0.838 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (6) | 0.716 | 0.761 | 0.521 | 0.524 | 0.711 | 0.847 | 2.041 | 3.006 | 33.415 | 46.796 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.47 |
| HGNC | HGNC:13104 |
| MGI | MGI:99182 |
| EntrezGene (human) | GeneID:7589 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:22697 (SSTAR profile) |
| UniProt ID (human) | ZSC21_HUMAN |
| UniProt ID (mouse) | ZSC21_MOUSE |
| UniProt AC (human) | Q9Y5A6 (TFClass) |
| UniProt AC (mouse) | Q07231 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZSC21.H12RSNP.0.P.D.pcm |
| PWM | ZSC21.H12RSNP.0.P.D.pwm |
| PFM | ZSC21.H12RSNP.0.P.D.pfm |
| Alignment | ZSC21.H12RSNP.0.P.D.words.tsv |
| Threshold to P-value map | ZSC21.H12RSNP.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZSC21.H12RSNP.0.P.D_jaspar_format.txt |
| MEME format | ZSC21.H12RSNP.0.P.D_meme_format.meme |
| Transfac format | ZSC21.H12RSNP.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 477.0 | 124.0 | 172.0 | 227.0 |
| 02 | 126.0 | 652.0 | 141.0 | 81.0 |
| 03 | 177.0 | 364.0 | 49.0 | 410.0 |
| 04 | 219.0 | 658.0 | 81.0 | 42.0 |
| 05 | 967.0 | 4.0 | 6.0 | 23.0 |
| 06 | 23.0 | 35.0 | 903.0 | 39.0 |
| 07 | 18.0 | 665.0 | 21.0 | 296.0 |
| 08 | 857.0 | 49.0 | 11.0 | 83.0 |
| 09 | 24.0 | 928.0 | 33.0 | 15.0 |
| 10 | 67.0 | 416.0 | 6.0 | 511.0 |
| 11 | 100.0 | 301.0 | 209.0 | 390.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.477 | 0.124 | 0.172 | 0.227 |
| 02 | 0.126 | 0.652 | 0.141 | 0.081 |
| 03 | 0.177 | 0.364 | 0.049 | 0.41 |
| 04 | 0.219 | 0.658 | 0.081 | 0.042 |
| 05 | 0.967 | 0.004 | 0.006 | 0.023 |
| 06 | 0.023 | 0.035 | 0.903 | 0.039 |
| 07 | 0.018 | 0.665 | 0.021 | 0.296 |
| 08 | 0.857 | 0.049 | 0.011 | 0.083 |
| 09 | 0.024 | 0.928 | 0.033 | 0.015 |
| 10 | 0.067 | 0.416 | 0.006 | 0.511 |
| 11 | 0.1 | 0.301 | 0.209 | 0.39 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.643 | -0.694 | -0.371 | -0.096 |
| 02 | -0.678 | 0.954 | -0.567 | -1.113 |
| 03 | -0.342 | 0.374 | -1.602 | 0.492 |
| 04 | -0.131 | 0.963 | -1.113 | -1.75 |
| 05 | 1.348 | -3.783 | -3.484 | -2.32 |
| 06 | -2.32 | -1.925 | 1.279 | -1.821 |
| 07 | -2.546 | 0.974 | -2.405 | 0.168 |
| 08 | 1.227 | -1.602 | -2.985 | -1.089 |
| 09 | -2.281 | 1.307 | -1.981 | -2.711 |
| 10 | -1.298 | 0.506 | -3.484 | 0.711 |
| 11 | -0.906 | 0.184 | -0.178 | 0.442 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.873485 |
| 0.0005 | 5.681565 |
| 0.0001 | 7.280945 |