MotifZSA5C.H12CORE.0.P.C
Gene (human)ZSCAN5C
(GeneCards)
Gene synonyms (human)ZSCAN5CP
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length17
ConsensusdGKGAGKbMWYdMRdvh
GC content42.38%
Information content (bits; total / per base)10.458 / 0.615
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (6) 0.846 0.875 0.758 0.78 0.838 0.857 3.498 3.559 73.423 104.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZSCAN5-like {2.3.3.5} (TFClass)
TFClass IDTFClass: 2.3.3.5.3
HGNCHGNC:34294
MGI
EntrezGene (human)
EntrezGene (mouse)
UniProt ID (human)ZSA5C_HUMAN
UniProt ID (mouse)
UniProt AC (human)A6NGD5
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01299.031.0196.0474.0
0288.062.0826.024.0
0392.026.0110.0772.0
0426.0149.0805.020.0
05936.038.016.010.0
06112.052.0824.012.0
0766.049.099.0786.0
08166.0428.0195.0211.0
09612.0220.040.0128.0
10614.0116.0116.0154.0
1169.0363.057.0511.0
12562.063.0215.0160.0
13630.0161.0109.0100.0
14624.071.0206.099.0
15369.065.0372.0194.0
16199.0451.0214.0136.0
17292.0369.090.0249.0
PFM
ACGT
010.2990.0310.1960.474
020.0880.0620.8260.024
030.0920.0260.110.772
040.0260.1490.8050.02
050.9360.0380.0160.01
060.1120.0520.8240.012
070.0660.0490.0990.786
080.1660.4280.1950.211
090.6120.220.040.128
100.6140.1160.1160.154
110.0690.3630.0570.511
120.5620.0630.2150.16
130.630.1610.1090.1
140.6240.0710.2060.099
150.3690.0650.3720.194
160.1990.4510.2140.136
170.2920.3690.090.249
PWM
ACGT
010.178-2.04-0.2410.636
02-1.032-1.3741.19-2.281
03-0.988-2.206-0.8121.123
04-2.206-0.5131.165-2.45
051.315-1.846-2.653-3.066
06-0.795-1.5441.188-2.909
07-1.313-1.602-0.9161.141
08-0.4060.535-0.247-0.168
090.891-0.127-1.797-0.663
100.894-0.76-0.76-0.48
11-1.270.371-1.4550.711
120.806-1.358-0.15-0.442
130.92-0.436-0.821-0.906
140.911-1.242-0.192-0.916
150.387-1.3280.395-0.252
16-0.2260.587-0.154-0.603
170.1540.387-1.01-0.004
Standard thresholds
P-value Threshold
0.001 4.59731
0.0005 5.41101
0.0001 7.11591