MotifZSA5A.H12INVIVO.0.SM.D
Gene (human)ZSCAN5A
(GeneCards)
Gene synonyms (human)ZNF495, ZSCAN5
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length19
ConsensusnhGTCCCYMCMCAAATMYb
GC content54.65%
Information content (bits; total / per base)20.652 / 1.087
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9065

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 1.0 1.0 1.0 0.999 0.997 0.996
best 1.0 1.0 1.0 1.0 0.998 0.997
Methyl HT-SELEX, 1 experiments median 1.0 1.0 1.0 1.0 0.998 0.997
best 1.0 1.0 1.0 1.0 0.998 0.997
Non-Methyl HT-SELEX, 1 experiments median 1.0 1.0 0.999 0.999 0.996 0.995
best 1.0 1.0 0.999 0.999 0.996 0.995
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZSCAN5-like {2.3.3.5} (TFClass)
TFClass IDTFClass: 2.3.3.5.1
HGNCHGNC:23710
MGI
EntrezGene (human)GeneID:79149
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZSA5A_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9BUG6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
012211.252506.252431.251916.25
021000.03105.0729.04231.0
03368.0360.07242.01095.0
04227.0203.0650.07985.0
05241.07670.0819.0335.0
0665.08978.017.05.0
07166.08609.025.0265.0
08343.05047.048.03627.0
092612.04923.0189.01341.0
101143.07725.046.0151.0
112190.05539.0495.0841.0
1211.09034.02.018.0
139032.011.021.01.0
149045.015.01.04.0
158854.09.0197.05.0
16277.033.01757.06998.0
171703.06571.066.0725.0
18573.02574.0803.05115.0
191525.53677.52004.51857.5
PFM
ACGT
010.2440.2760.2680.211
020.110.3430.080.467
030.0410.040.7990.121
040.0250.0220.0720.881
050.0270.8460.090.037
060.0070.990.0020.001
070.0180.950.0030.029
080.0380.5570.0050.4
090.2880.5430.0210.148
100.1260.8520.0050.017
110.2420.6110.0550.093
120.0010.9970.00.002
130.9960.0010.0020.0
140.9980.0020.00.0
150.9770.0010.0220.001
160.0310.0040.1940.772
170.1880.7250.0070.08
180.0630.2840.0890.564
190.1680.4060.2210.205
PWM
ACGT
01-0.0250.1010.07-0.168
02-0.8170.315-1.1320.624
03-1.813-1.8341.161-0.726
04-2.292-2.403-1.2461.259
05-2.2331.218-1.016-1.906
06-3.5181.376-4.768-5.742
07-2.6011.334-4.421-2.139
08-1.8830.8-3.8090.47
090.1420.775-2.473-0.524
10-0.6831.226-3.85-2.695
11-0.0340.893-1.518-0.99
12-5.1411.382-6.273-4.717
131.382-5.141-4.579-6.54
141.383-4.877-6.54-5.89
151.362-5.304-2.432-5.742
16-2.095-4.164-0.2541.127
17-0.2851.064-3.503-1.138
18-1.3720.127-1.0360.813
19-0.3950.484-0.123-0.199
Standard thresholds
P-value Threshold
0.001 -1.58789
0.0005 0.12296
0.0001 3.70771