| Motif | ZNF85.H12INVITRO.0.P.D |
| Gene (human) | ZNF85 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZNF85.H12INVITRO.0.P.D |
| Gene (human) | ZNF85 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 13 |
| Consensus | KGMWGdAATCYbh |
| GC content | 40.11% |
| Information content (bits; total / per base) | 12.413 / 0.955 |
| Data sources | ChIP-Seq |
| Aligned words | 999 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (9) | 0.873 | 0.958 | 0.823 | 0.944 | 0.874 | 0.94 | 4.091 | 5.069 | 239.886 | 385.886 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.198 |
| HGNC | HGNC:13160 |
| MGI | |
| EntrezGene (human) | GeneID:7639 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZNF85_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | Q03923 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZNF85.H12INVITRO.0.P.D.pcm |
| PWM | ZNF85.H12INVITRO.0.P.D.pwm |
| PFM | ZNF85.H12INVITRO.0.P.D.pfm |
| Alignment | ZNF85.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | ZNF85.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZNF85.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | ZNF85.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | ZNF85.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 110.0 | 45.0 | 122.0 | 722.0 |
| 02 | 168.0 | 7.0 | 814.0 | 10.0 |
| 03 | 571.0 | 373.0 | 27.0 | 28.0 |
| 04 | 513.0 | 54.0 | 49.0 | 383.0 |
| 05 | 40.0 | 5.0 | 946.0 | 8.0 |
| 06 | 129.0 | 85.0 | 346.0 | 439.0 |
| 07 | 973.0 | 14.0 | 3.0 | 9.0 |
| 08 | 837.0 | 137.0 | 11.0 | 14.0 |
| 09 | 6.0 | 41.0 | 16.0 | 936.0 |
| 10 | 14.0 | 931.0 | 18.0 | 36.0 |
| 11 | 132.0 | 161.0 | 11.0 | 695.0 |
| 12 | 101.0 | 388.0 | 129.0 | 381.0 |
| 13 | 157.0 | 365.0 | 111.0 | 366.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.11 | 0.045 | 0.122 | 0.723 |
| 02 | 0.168 | 0.007 | 0.815 | 0.01 |
| 03 | 0.572 | 0.373 | 0.027 | 0.028 |
| 04 | 0.514 | 0.054 | 0.049 | 0.383 |
| 05 | 0.04 | 0.005 | 0.947 | 0.008 |
| 06 | 0.129 | 0.085 | 0.346 | 0.439 |
| 07 | 0.974 | 0.014 | 0.003 | 0.009 |
| 08 | 0.838 | 0.137 | 0.011 | 0.014 |
| 09 | 0.006 | 0.041 | 0.016 | 0.937 |
| 10 | 0.014 | 0.932 | 0.018 | 0.036 |
| 11 | 0.132 | 0.161 | 0.011 | 0.696 |
| 12 | 0.101 | 0.388 | 0.129 | 0.381 |
| 13 | 0.157 | 0.365 | 0.111 | 0.366 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.811 | -1.683 | -0.709 | 1.057 |
| 02 | -0.393 | -3.361 | 1.177 | -3.065 |
| 03 | 0.823 | 0.399 | -2.17 | -2.135 |
| 04 | 0.716 | -1.507 | -1.601 | 0.425 |
| 05 | -1.796 | -3.621 | 1.327 | -3.252 |
| 06 | -0.654 | -1.065 | 0.324 | 0.561 |
| 07 | 1.355 | -2.772 | -3.974 | -3.155 |
| 08 | 1.205 | -0.595 | -2.984 | -2.772 |
| 09 | -3.483 | -1.773 | -2.652 | 1.316 |
| 10 | -2.772 | 1.311 | -2.545 | -1.897 |
| 11 | -0.632 | -0.435 | -2.984 | 1.019 |
| 12 | -0.895 | 0.438 | -0.654 | 0.42 |
| 13 | -0.46 | 0.377 | -0.802 | 0.38 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.00941 |
| 0.0005 | 5.02441 |
| 0.0001 | 7.121565 |