MotifZNF8.H12CORE.0.P.C
Gene (human)ZNF8
(GeneCards)
Gene synonyms (human)
Gene (mouse)Znf8
Gene synonyms (mouse)Zfp128
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length21
ConsensusvnvhvbGGTAYGnChhnSnnn
GC content60.08%
Information content (bits; total / per base)12.636 / 0.602
Data sourcesChIP-Seq
Aligned words68

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 3 (15) 0.809 0.927 0.721 0.882 0.794 0.945 2.662 5.216 44.42 258.886
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.29
HGNCHGNC:13154
MGIMGI:2389445
EntrezGene (human)GeneID:7554
(SSTAR profile)
EntrezGene (mouse)GeneID:243833
(SSTAR profile)
UniProt ID (human)ZNF8_HUMAN
UniProt ID (mouse)ZNF8_MOUSE
UniProt AC (human)P17098
(TFClass)
UniProt AC (mouse)Q8BGV5
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 3 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0112.023.028.05.0
0217.027.017.07.0
0317.030.013.08.0
0412.016.010.030.0
0515.020.028.05.0
064.017.011.036.0
070.00.067.01.0
080.00.068.00.0
090.012.01.055.0
1065.00.03.00.0
116.048.05.09.0
123.01.063.01.0
137.033.07.021.0
142.060.03.03.0
1518.016.09.025.0
1629.013.010.016.0
179.019.022.018.0
184.014.039.011.0
1925.016.011.016.0
2018.019.020.011.0
2115.023.016.014.0
PFM
ACGT
010.1760.3380.4120.074
020.250.3970.250.103
030.250.4410.1910.118
040.1760.2350.1470.441
050.2210.2940.4120.074
060.0590.250.1620.529
070.00.00.9850.015
080.00.01.00.0
090.00.1760.0150.809
100.9560.00.0440.0
110.0880.7060.0740.132
120.0440.0150.9260.015
130.1030.4850.1030.309
140.0290.8820.0440.044
150.2650.2350.1320.368
160.4260.1910.1470.235
170.1320.2790.3240.265
180.0590.2060.5740.162
190.3680.2350.1620.235
200.2650.2790.2940.162
210.2210.3380.2350.206
PWM
ACGT
01-0.3240.2870.476-1.093
020.00.4410.0-0.807
030.00.542-0.25-0.69
04-0.324-0.057-0.4910.542
05-0.1170.1540.476-1.093
06-1.2730.0-0.4040.719
07-2.84-2.841.327-2.173
08-2.84-2.841.341-2.84
09-2.84-0.324-2.1731.133
101.297-2.84-1.493-2.84
11-0.941.0-1.093-0.585
12-1.493-2.1731.266-2.173
13-0.8070.635-0.8070.2
14-1.7771.218-1.493-1.493
150.054-0.057-0.5850.367
160.51-0.25-0.491-0.057
17-0.5850.1050.2440.054
18-1.273-0.1820.797-0.404
190.367-0.057-0.404-0.057
200.0540.1050.154-0.404
21-0.1170.287-0.057-0.182
Standard thresholds
P-value Threshold
0.001 4.47426
0.0005 5.35881
0.0001 7.19451