MotifZNF79.H12INVITRO.0.P.D
Gene (human)ZNF79
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length21
ConsensushhMAWvRARWdMMYvYCTAAb
GC content30.52%
Information content (bits; total / per base)15.961 / 0.76
Data sourcesChIP-Seq
Aligned words403

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.879 0.888 0.844 0.853 0.911 0.923 6.087 6.191 86.921 123.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.122
HGNCHGNC:13153
MGI
EntrezGene (human)GeneID:7633
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZNF79_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q15937
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01109.0145.051.098.0
0288.0188.037.090.0
03270.061.044.028.0
04328.018.028.029.0
05309.09.028.057.0
0683.068.0214.038.0
07286.010.098.09.0
08370.010.09.014.0
09279.032.086.06.0
10160.014.028.0201.0
1173.018.0153.0159.0
12321.039.030.013.0
13295.066.025.017.0
1432.033.017.0321.0
1598.0167.076.062.0
1647.052.016.0288.0
1718.0326.040.019.0
1839.02.047.0315.0
19376.011.011.05.0
20371.09.012.011.0
2115.087.0168.0133.0
PFM
ACGT
010.270.360.1270.243
020.2180.4670.0920.223
030.670.1510.1090.069
040.8140.0450.0690.072
050.7670.0220.0690.141
060.2060.1690.5310.094
070.710.0250.2430.022
080.9180.0250.0220.035
090.6920.0790.2130.015
100.3970.0350.0690.499
110.1810.0450.380.395
120.7970.0970.0740.032
130.7320.1640.0620.042
140.0790.0820.0420.797
150.2430.4140.1890.154
160.1170.1290.040.715
170.0450.8090.0990.047
180.0970.0050.1170.782
190.9330.0270.0270.012
200.9210.0220.030.027
210.0370.2160.4170.33
PWM
ACGT
010.0780.36-0.667-0.027
02-0.1330.617-0.977-0.111
030.977-0.492-0.81-1.243
041.17-1.657-1.243-1.21
051.111-2.276-1.243-0.558
06-0.191-0.3860.746-0.951
071.034-2.185-0.027-2.276
081.29-2.185-2.276-1.887
091.009-1.116-0.156-2.613
100.457-1.887-1.2430.683
11-0.317-1.6570.4130.451
121.149-0.926-1.177-1.953
131.065-0.415-1.35-1.71
14-1.116-1.086-1.711.149
15-0.0270.5-0.277-0.476
16-0.746-0.648-1.7651.041
17-1.6571.164-0.902-1.607
18-0.926-3.375-0.7461.13
191.306-2.102-2.102-2.756
201.293-2.276-2.025-2.102
21-1.824-0.1440.5050.274
Standard thresholds
P-value Threshold
0.001 3.19431
0.0005 4.23836
0.0001 6.46131