MotifZNF76.H12INVIVO.1.SM.B
Gene (human)ZNF76
(GeneCards)
Gene synonyms (human)D6S229E, ZNF523
Gene (mouse)Znf76
Gene synonyms (mouse)Zfp523
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length19
ConsensusbSYRdKGCATTRTGGGWdd
GC content51.8%
Information content (bits; total / per base)19.582 / 1.031
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words6502

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (12) 0.905 0.93 0.851 0.892 0.917 0.93 4.767 5.021 189.355 305.337

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.955 0.954 0.773 0.785 0.65 0.675
best 0.956 0.954 0.777 0.788 0.652 0.677
Methyl HT-SELEX, 1 experiments median 0.954 0.953 0.768 0.782 0.647 0.673
best 0.954 0.953 0.768 0.782 0.647 0.673
Non-Methyl HT-SELEX, 1 experiments median 0.956 0.954 0.777 0.788 0.652 0.677
best 0.956 0.954 0.777 0.788 0.652 0.677

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 6.124 2.014 0.202 0.106
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF76-like {2.3.3.28} (TFClass)
TFClass IDTFClass: 2.3.3.28.1
HGNCHGNC:13149
MGIMGI:2687278
EntrezGene (human)GeneID:7629
(SSTAR profile)
EntrezGene (mouse)GeneID:224656
(SSTAR profile)
UniProt ID (human)ZNF76_HUMAN
UniProt ID (mouse)ZNF76_MOUSE
UniProt AC (human)P36508
(TFClass)
UniProt AC (mouse)Q8BMU0
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
01774.753872.75868.75985.75
02497.75837.754923.75242.75
03836.03892.0280.01494.0
042810.0126.03242.0324.0
052514.0293.02329.01366.0
06542.087.0878.04995.0
0716.08.06451.027.0
08235.05544.0587.0136.0
096115.0111.0206.070.0
1055.0214.0130.06103.0
1130.0328.0804.05340.0
123103.0681.02444.0274.0
13146.0316.022.06018.0
1412.015.06446.029.0
1516.031.06437.018.0
1641.022.06308.0131.0
173178.0208.0366.02750.0
183570.25480.251299.251152.25
192330.5892.52006.51272.5
PFM
ACGT
010.1190.5960.1340.152
020.0770.1290.7570.037
030.1290.5990.0430.23
040.4320.0190.4990.05
050.3870.0450.3580.21
060.0830.0130.1350.768
070.0020.0010.9920.004
080.0360.8530.090.021
090.940.0170.0320.011
100.0080.0330.020.939
110.0050.050.1240.821
120.4770.1050.3760.042
130.0220.0490.0030.926
140.0020.0020.9910.004
150.0020.0050.990.003
160.0060.0030.970.02
170.4890.0320.0560.423
180.5490.0740.20.177
190.3580.1370.3090.196
PWM
ACGT
01-0.740.867-0.625-0.499
02-1.18-0.6621.107-1.894
03-0.6640.872-1.752-0.084
040.547-2.5410.69-1.607
050.436-1.7070.359-0.174
06-1.096-2.904-0.6151.122
07-4.494-5.0731.377-4.021
08-1.9261.226-1.016-2.466
091.324-2.666-2.056-3.116
10-3.348-2.019-2.5111.322
11-3.923-1.595-0.7031.188
120.646-0.8680.407-1.774
13-2.396-1.632-4.2091.308
14-4.742-4.551.377-3.955
15-4.494-3.8931.375-4.389
16-3.629-4.2091.355-2.503
170.67-2.047-1.4860.525
180.786-1.216-0.224-0.344
190.36-0.5980.21-0.244
Standard thresholds
P-value Threshold
0.001 0.18866
0.0005 1.65296
0.0001 4.74066