| Motif | ZNF76.H12INVIVO.0.P.B |
| Gene (human) | ZNF76 (GeneCards) |
| Gene synonyms (human) | D6S229E, ZNF523 |
| Gene (mouse) | Znf76 |
| Gene synonyms (mouse) | Zfp523 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | ZNF76.H12INVIVO.0.P.B |
| Gene (human) | ZNF76 (GeneCards) |
| Gene synonyms (human) | D6S229E, ZNF523 |
| Gene (mouse) | Znf76 |
| Gene synonyms (mouse) | Zfp523 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 23 |
| Consensus | MvvdGShYbSYGGGAvdbSbRRb |
| GC content | 59.4% |
| Information content (bits; total / per base) | 15.175 / 0.66 |
| Data sources | ChIP-Seq |
| Aligned words | 1002 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (12) | 0.916 | 0.936 | 0.885 | 0.914 | 0.939 | 0.959 | 8.717 | 9.066 | 221.515 | 365.585 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 2 experiments | median | 0.808 | 0.773 | 0.679 | 0.669 | 0.588 | 0.601 |
| best | 0.822 | 0.794 | 0.683 | 0.675 | 0.6 | 0.603 | |
| Methyl HT-SELEX, 1 experiments | median | 0.793 | 0.753 | 0.683 | 0.664 | 0.6 | 0.603 |
| best | 0.793 | 0.753 | 0.683 | 0.664 | 0.6 | 0.603 | |
| Non-Methyl HT-SELEX, 1 experiments | median | 0.822 | 0.794 | 0.676 | 0.675 | 0.577 | 0.6 |
| best | 0.822 | 0.794 | 0.676 | 0.675 | 0.577 | 0.6 | |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 6.098 | 2.009 | 0.21 | 0.123 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF76-like {2.3.3.28} (TFClass) |
| TFClass ID | TFClass: 2.3.3.28.1 |
| HGNC | HGNC:13149 |
| MGI | MGI:2687278 |
| EntrezGene (human) | GeneID:7629 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:224656 (SSTAR profile) |
| UniProt ID (human) | ZNF76_HUMAN |
| UniProt ID (mouse) | ZNF76_MOUSE |
| UniProt AC (human) | P36508 (TFClass) |
| UniProt AC (mouse) | Q8BMU0 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 1 |
| PCM | ZNF76.H12INVIVO.0.P.B.pcm |
| PWM | ZNF76.H12INVIVO.0.P.B.pwm |
| PFM | ZNF76.H12INVIVO.0.P.B.pfm |
| Alignment | ZNF76.H12INVIVO.0.P.B.words.tsv |
| Threshold to P-value map | ZNF76.H12INVIVO.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | ZNF76.H12INVIVO.0.P.B_jaspar_format.txt |
| MEME format | ZNF76.H12INVIVO.0.P.B_meme_format.meme |
| Transfac format | ZNF76.H12INVIVO.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 128.0 | 669.0 | 103.0 | 102.0 |
| 02 | 310.0 | 99.0 | 503.0 | 90.0 |
| 03 | 239.0 | 160.0 | 505.0 | 98.0 |
| 04 | 232.0 | 54.0 | 500.0 | 216.0 |
| 05 | 16.0 | 36.0 | 920.0 | 30.0 |
| 06 | 119.0 | 514.0 | 334.0 | 35.0 |
| 07 | 485.0 | 340.0 | 69.0 | 108.0 |
| 08 | 58.0 | 189.0 | 89.0 | 666.0 |
| 09 | 42.0 | 187.0 | 427.0 | 346.0 |
| 10 | 137.0 | 649.0 | 144.0 | 72.0 |
| 11 | 52.0 | 226.0 | 17.0 | 707.0 |
| 12 | 7.0 | 14.0 | 975.0 | 6.0 |
| 13 | 11.0 | 9.0 | 977.0 | 5.0 |
| 14 | 29.0 | 8.0 | 946.0 | 19.0 |
| 15 | 836.0 | 36.0 | 57.0 | 73.0 |
| 16 | 403.0 | 141.0 | 353.0 | 105.0 |
| 17 | 313.0 | 133.0 | 205.0 | 351.0 |
| 18 | 119.0 | 152.0 | 205.0 | 526.0 |
| 19 | 83.0 | 121.0 | 719.0 | 79.0 |
| 20 | 129.0 | 146.0 | 242.0 | 485.0 |
| 21 | 584.0 | 120.0 | 234.0 | 64.0 |
| 22 | 114.0 | 108.0 | 701.0 | 79.0 |
| 23 | 97.0 | 124.0 | 229.0 | 552.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.128 | 0.668 | 0.103 | 0.102 |
| 02 | 0.309 | 0.099 | 0.502 | 0.09 |
| 03 | 0.239 | 0.16 | 0.504 | 0.098 |
| 04 | 0.232 | 0.054 | 0.499 | 0.216 |
| 05 | 0.016 | 0.036 | 0.918 | 0.03 |
| 06 | 0.119 | 0.513 | 0.333 | 0.035 |
| 07 | 0.484 | 0.339 | 0.069 | 0.108 |
| 08 | 0.058 | 0.189 | 0.089 | 0.665 |
| 09 | 0.042 | 0.187 | 0.426 | 0.345 |
| 10 | 0.137 | 0.648 | 0.144 | 0.072 |
| 11 | 0.052 | 0.226 | 0.017 | 0.706 |
| 12 | 0.007 | 0.014 | 0.973 | 0.006 |
| 13 | 0.011 | 0.009 | 0.975 | 0.005 |
| 14 | 0.029 | 0.008 | 0.944 | 0.019 |
| 15 | 0.834 | 0.036 | 0.057 | 0.073 |
| 16 | 0.402 | 0.141 | 0.352 | 0.105 |
| 17 | 0.312 | 0.133 | 0.205 | 0.35 |
| 18 | 0.119 | 0.152 | 0.205 | 0.525 |
| 19 | 0.083 | 0.121 | 0.718 | 0.079 |
| 20 | 0.129 | 0.146 | 0.242 | 0.484 |
| 21 | 0.583 | 0.12 | 0.234 | 0.064 |
| 22 | 0.114 | 0.108 | 0.7 | 0.079 |
| 23 | 0.097 | 0.124 | 0.229 | 0.551 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.665 | 0.978 | -0.879 | -0.889 |
| 02 | 0.212 | -0.918 | 0.694 | -1.012 |
| 03 | -0.047 | -0.444 | 0.698 | -0.928 |
| 04 | -0.076 | -1.51 | 0.688 | -0.147 |
| 05 | -2.655 | -1.9 | 1.296 | -2.073 |
| 06 | -0.737 | 0.715 | 0.286 | -1.927 |
| 07 | 0.657 | 0.304 | -1.271 | -0.832 |
| 08 | -1.441 | -0.279 | -1.022 | 0.974 |
| 09 | -1.752 | -0.29 | 0.53 | 0.321 |
| 10 | -0.598 | 0.948 | -0.549 | -1.23 |
| 11 | -1.546 | -0.102 | -2.6 | 1.033 |
| 12 | -3.364 | -2.775 | 1.354 | -3.486 |
| 13 | -2.987 | -3.158 | 1.356 | -3.624 |
| 14 | -2.105 | -3.255 | 1.324 | -2.499 |
| 15 | 1.2 | -1.9 | -1.457 | -1.216 |
| 16 | 0.473 | -0.569 | 0.341 | -0.86 |
| 17 | 0.221 | -0.627 | -0.199 | 0.335 |
| 18 | -0.737 | -0.495 | -0.199 | 0.738 |
| 19 | -1.091 | -0.72 | 1.05 | -1.139 |
| 20 | -0.657 | -0.535 | -0.034 | 0.657 |
| 21 | 0.843 | -0.729 | -0.068 | -1.345 |
| 22 | -0.779 | -0.832 | 1.025 | -1.139 |
| 23 | -0.938 | -0.696 | -0.089 | 0.786 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.26706 |
| 0.0005 | 4.33421 |
| 0.0001 | 6.58186 |