MotifZNF76.H12CORE.0.P.B
Gene (human)ZNF76
(GeneCards)
Gene synonyms (human)D6S229E, ZNF523
Gene (mouse)Znf76
Gene synonyms (mouse)Zfp523
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length23
ConsensusMvvdGShYbSYGGGAvdbSbRRb
GC content59.4%
Information content (bits; total / per base)15.175 / 0.66
Data sourcesChIP-Seq
Aligned words1002

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (12) 0.916 0.936 0.885 0.914 0.939 0.959 8.717 9.066 221.515 365.585

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.808 0.773 0.679 0.669 0.588 0.601
best 0.822 0.794 0.683 0.675 0.6 0.603
Methyl HT-SELEX, 1 experiments median 0.793 0.753 0.683 0.664 0.6 0.603
best 0.793 0.753 0.683 0.664 0.6 0.603
Non-Methyl HT-SELEX, 1 experiments median 0.822 0.794 0.676 0.675 0.577 0.6
best 0.822 0.794 0.676 0.675 0.577 0.6

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 6.098 2.009 0.21 0.123
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF76-like {2.3.3.28} (TFClass)
TFClass IDTFClass: 2.3.3.28.1
HGNCHGNC:13149
MGIMGI:2687278
EntrezGene (human)GeneID:7629
(SSTAR profile)
EntrezGene (mouse)GeneID:224656
(SSTAR profile)
UniProt ID (human)ZNF76_HUMAN
UniProt ID (mouse)ZNF76_MOUSE
UniProt AC (human)P36508
(TFClass)
UniProt AC (mouse)Q8BMU0
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
01128.0669.0103.0102.0
02310.099.0503.090.0
03239.0160.0505.098.0
04232.054.0500.0216.0
0516.036.0920.030.0
06119.0514.0334.035.0
07485.0340.069.0108.0
0858.0189.089.0666.0
0942.0187.0427.0346.0
10137.0649.0144.072.0
1152.0226.017.0707.0
127.014.0975.06.0
1311.09.0977.05.0
1429.08.0946.019.0
15836.036.057.073.0
16403.0141.0353.0105.0
17313.0133.0205.0351.0
18119.0152.0205.0526.0
1983.0121.0719.079.0
20129.0146.0242.0485.0
21584.0120.0234.064.0
22114.0108.0701.079.0
2397.0124.0229.0552.0
PFM
ACGT
010.1280.6680.1030.102
020.3090.0990.5020.09
030.2390.160.5040.098
040.2320.0540.4990.216
050.0160.0360.9180.03
060.1190.5130.3330.035
070.4840.3390.0690.108
080.0580.1890.0890.665
090.0420.1870.4260.345
100.1370.6480.1440.072
110.0520.2260.0170.706
120.0070.0140.9730.006
130.0110.0090.9750.005
140.0290.0080.9440.019
150.8340.0360.0570.073
160.4020.1410.3520.105
170.3120.1330.2050.35
180.1190.1520.2050.525
190.0830.1210.7180.079
200.1290.1460.2420.484
210.5830.120.2340.064
220.1140.1080.70.079
230.0970.1240.2290.551
PWM
ACGT
01-0.6650.978-0.879-0.889
020.212-0.9180.694-1.012
03-0.047-0.4440.698-0.928
04-0.076-1.510.688-0.147
05-2.655-1.91.296-2.073
06-0.7370.7150.286-1.927
070.6570.304-1.271-0.832
08-1.441-0.279-1.0220.974
09-1.752-0.290.530.321
10-0.5980.948-0.549-1.23
11-1.546-0.102-2.61.033
12-3.364-2.7751.354-3.486
13-2.987-3.1581.356-3.624
14-2.105-3.2551.324-2.499
151.2-1.9-1.457-1.216
160.473-0.5690.341-0.86
170.221-0.627-0.1990.335
18-0.737-0.495-0.1990.738
19-1.091-0.721.05-1.139
20-0.657-0.535-0.0340.657
210.843-0.729-0.068-1.345
22-0.779-0.8321.025-1.139
23-0.938-0.696-0.0890.786
Standard thresholds
P-value Threshold
0.001 3.26706
0.0005 4.33421
0.0001 6.58186