MotifZNF7.H12INVIVO.0.P.B
Gene (human)ZNF7
(GeneCards)
Gene synonyms (human)KOX4
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length23
ConsensusbhbYGYYdvCWCTTRnddbKdbY
GC content47.32%
Information content (bits; total / per base)13.95 / 0.607
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.85 0.876 0.819 0.84 0.861 0.875 6.404 7.317 243.027 485.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.190
HGNCHGNC:13139
MGI
EntrezGene (human)GeneID:7553
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZNF7_HUMAN
UniProt ID (mouse)
UniProt AC (human)P17097
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01100.0514.0135.0251.0
02106.0525.065.0304.0
0396.0256.0169.0479.0
0449.0107.054.0790.0
0573.054.0809.064.0
0664.0541.010.0385.0
0799.0687.085.0129.0
08526.080.0154.0240.0
09362.0220.0381.037.0
1015.0973.02.010.0
11613.047.05.0335.0
120.0683.03.0314.0
13113.043.024.0820.0
1428.068.042.0862.0
15306.041.0542.0111.0
16178.0158.0343.0321.0
17234.0107.0244.0415.0
18409.0122.0192.0277.0
1985.0275.0105.0535.0
20106.080.0117.0697.0
21164.0103.0539.0194.0
2253.0215.0182.0550.0
2351.0728.055.0166.0
PFM
ACGT
010.10.5140.1350.251
020.1060.5250.0650.304
030.0960.2560.1690.479
040.0490.1070.0540.79
050.0730.0540.8090.064
060.0640.5410.010.385
070.0990.6870.0850.129
080.5260.080.1540.24
090.3620.220.3810.037
100.0150.9730.0020.01
110.6130.0470.0050.335
120.00.6830.0030.314
130.1130.0430.0240.82
140.0280.0680.0420.862
150.3060.0410.5420.111
160.1780.1580.3430.321
170.2340.1070.2440.415
180.4090.1220.1920.277
190.0850.2750.1050.535
200.1060.080.1170.697
210.1640.1030.5390.194
220.0530.2150.1820.55
230.0510.7280.0550.166
PWM
ACGT
01-0.9060.717-0.610.004
02-0.8490.738-1.3280.194
03-0.9460.024-0.3880.647
04-1.602-0.84-1.5081.146
05-1.215-1.5081.17-1.343
06-1.3430.768-3.0660.429
07-0.9161.006-1.066-0.655
080.74-1.125-0.48-0.041
090.368-0.1270.419-1.872
10-2.7111.354-4.213-3.066
110.893-1.642-3.6220.291
12-4.9821.001-3.9750.227
13-0.786-1.728-2.2811.183
14-2.136-1.284-1.751.233
150.201-1.7740.77-0.803
16-0.337-0.4550.3140.248
17-0.066-0.84-0.0240.504
180.49-0.71-0.2620.102
19-1.0660.095-0.8580.757
20-0.849-1.125-0.7521.021
21-0.418-0.8770.765-0.252
22-1.526-0.15-0.3150.785
23-1.5631.064-1.49-0.406
Standard thresholds
P-value Threshold
0.001 3.72481
0.0005 4.72311
0.0001 6.81541