| Motif | ZNF41.H12RSNP.1.P.D |
| Gene (human) | ZNF41 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | ZNF41.H12RSNP.1.P.D |
| Gene (human) | ZNF41 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 15 |
| Consensus | nMAhRRGGRAdhvhv |
| GC content | 48.65% |
| Information content (bits; total / per base) | 10.754 / 0.717 |
| Data sources | ChIP-Seq |
| Aligned words | 1029 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (5) | 0.83 | 0.838 | 0.744 | 0.753 | 0.831 | 0.84 | 2.997 | 3.072 | 301.076 | 342.432 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF81-like {2.3.3.68} (TFClass) |
| TFClass ID | TFClass: 2.3.3.68.3 |
| HGNC | HGNC:13107 |
| MGI | |
| EntrezGene (human) | GeneID:7592 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZNF41_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | P51814 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZNF41.H12RSNP.1.P.D.pcm |
| PWM | ZNF41.H12RSNP.1.P.D.pwm |
| PFM | ZNF41.H12RSNP.1.P.D.pfm |
| Alignment | ZNF41.H12RSNP.1.P.D.words.tsv |
| Threshold to P-value map | ZNF41.H12RSNP.1.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZNF41.H12RSNP.1.P.D_jaspar_format.txt |
| MEME format | ZNF41.H12RSNP.1.P.D_meme_format.meme |
| Transfac format | ZNF41.H12RSNP.1.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 260.0 | 389.0 | 178.0 | 202.0 |
| 02 | 207.0 | 713.0 | 78.0 | 31.0 |
| 03 | 897.0 | 15.0 | 112.0 | 5.0 |
| 04 | 150.0 | 549.0 | 58.0 | 272.0 |
| 05 | 678.0 | 20.0 | 307.0 | 24.0 |
| 06 | 713.0 | 9.0 | 183.0 | 124.0 |
| 07 | 17.0 | 2.0 | 1001.0 | 9.0 |
| 08 | 33.0 | 57.0 | 846.0 | 93.0 |
| 09 | 453.0 | 5.0 | 568.0 | 3.0 |
| 10 | 1005.0 | 3.0 | 13.0 | 8.0 |
| 11 | 308.0 | 69.0 | 539.0 | 113.0 |
| 12 | 385.0 | 168.0 | 98.0 | 378.0 |
| 13 | 369.0 | 129.0 | 406.0 | 125.0 |
| 14 | 441.0 | 258.0 | 161.0 | 169.0 |
| 15 | 360.0 | 285.0 | 290.0 | 94.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.253 | 0.378 | 0.173 | 0.196 |
| 02 | 0.201 | 0.693 | 0.076 | 0.03 |
| 03 | 0.872 | 0.015 | 0.109 | 0.005 |
| 04 | 0.146 | 0.534 | 0.056 | 0.264 |
| 05 | 0.659 | 0.019 | 0.298 | 0.023 |
| 06 | 0.693 | 0.009 | 0.178 | 0.121 |
| 07 | 0.017 | 0.002 | 0.973 | 0.009 |
| 08 | 0.032 | 0.055 | 0.822 | 0.09 |
| 09 | 0.44 | 0.005 | 0.552 | 0.003 |
| 10 | 0.977 | 0.003 | 0.013 | 0.008 |
| 11 | 0.299 | 0.067 | 0.524 | 0.11 |
| 12 | 0.374 | 0.163 | 0.095 | 0.367 |
| 13 | 0.359 | 0.125 | 0.395 | 0.121 |
| 14 | 0.429 | 0.251 | 0.156 | 0.164 |
| 15 | 0.35 | 0.277 | 0.282 | 0.091 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.011 | 0.411 | -0.365 | -0.24 |
| 02 | -0.216 | 1.015 | -1.178 | -2.068 |
| 03 | 1.244 | -2.739 | -0.823 | -3.65 |
| 04 | -0.535 | 0.754 | -1.467 | 0.055 |
| 05 | 0.965 | -2.478 | 0.176 | -2.309 |
| 06 | 1.015 | -3.183 | -0.338 | -0.723 |
| 07 | -2.626 | -4.239 | 1.354 | -3.183 |
| 08 | -2.009 | -1.484 | 1.186 | -1.006 |
| 09 | 0.563 | -3.65 | 0.788 | -4.002 |
| 10 | 1.358 | -4.002 | -2.867 | -3.281 |
| 11 | 0.179 | -1.298 | 0.736 | -0.814 |
| 12 | 0.401 | -0.423 | -0.954 | 0.383 |
| 13 | 0.359 | -0.684 | 0.454 | -0.715 |
| 14 | 0.536 | 0.003 | -0.465 | -0.417 |
| 15 | 0.334 | 0.102 | 0.119 | -0.995 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.57631 |
| 0.0005 | 5.49236 |
| 0.0001 | 7.32591 |