MotifZNF32.H12CORE.0.SM.B
Gene (human)ZNF32
(GeneCards)
Gene synonyms (human)KOX30
Gene (mouse)Znf32
Gene synonyms (mouse)Zfp637
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length15
ConsensusnbGWWACvYGAYAYv
GC content46.21%
Information content (bits; total / per base)13.366 / 0.891
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words1807

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.993 0.99 0.974 0.967 0.902 0.894
best 0.998 0.996 0.99 0.987 0.937 0.931
Methyl HT-SELEX, 1 experiments median 0.998 0.996 0.99 0.987 0.937 0.931
best 0.998 0.996 0.99 0.987 0.937 0.931
Non-Methyl HT-SELEX, 1 experiments median 0.989 0.984 0.958 0.946 0.866 0.857
best 0.989 0.984 0.958 0.946 0.866 0.857

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 2 0.739 0.355 0.747 0.559
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF32-like {2.3.3.41} (TFClass)
TFClass IDTFClass: 2.3.3.41.1
HGNCHGNC:13095
MGIMGI:2448537
EntrezGene (human)GeneID:7580
(SSTAR profile)
EntrezGene (mouse)GeneID:232337
(SSTAR profile)
UniProt ID (human)ZNF32_HUMAN
UniProt ID (mouse)ZNF32_MOUSE
UniProt AC (human)P17041
(TFClass)
UniProt AC (mouse)Q80V23
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
01516.5433.5564.5292.5
02105.25663.25308.25730.25
0344.024.01717.022.0
04328.087.025.01367.0
051375.0105.05.0322.0
061779.05.06.017.0
0713.01542.066.0186.0
08343.0853.0440.0171.0
0929.0539.086.01153.0
10169.018.01482.0138.0
111735.013.011.048.0
1271.0417.0112.01207.0
131445.0293.048.021.0
14116.51238.5149.5302.5
15314.5756.5518.5217.5
PFM
ACGT
010.2860.240.3120.162
020.0580.3670.1710.404
030.0240.0130.950.012
040.1820.0480.0140.757
050.7610.0580.0030.178
060.9850.0030.0030.009
070.0070.8530.0370.103
080.190.4720.2430.095
090.0160.2980.0480.638
100.0940.010.820.076
110.960.0070.0060.027
120.0390.2310.0620.668
130.80.1620.0270.012
140.0640.6850.0830.167
150.1740.4190.2870.12
PWM
ACGT
010.133-0.0410.222-0.432
02-1.4430.383-0.380.479
03-2.291-2.8641.332-2.944
04-0.319-1.63-2.8261.104
051.11-1.446-4.189-0.337
061.368-4.189-4.054-3.179
07-3.4181.225-1.9-0.881
08-0.2740.634-0.026-0.965
09-2.6870.176-1.6410.934
10-0.976-3.1281.185-1.177
111.343-3.418-3.562-2.208
12-1.829-0.08-1.3820.98
131.16-0.431-2.208-2.987
14-1.3431.006-1.098-0.399
15-0.360.5140.137-0.726
Standard thresholds
P-value Threshold
0.001 3.67306
0.0005 4.73691
0.0001 6.94076