MotifZNF26.H12INVITRO.0.P.D
Gene (human)ZNF26
(GeneCards)
Gene synonyms (human)KOX20
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusATGWCYRRMAYhYARYMRAAAAT
GC content34.18%
Information content (bits; total / per base)22.845 / 0.993
Data sourcesChIP-Seq
Aligned words209

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.908 0.977 0.897 0.967 0.903 0.974 8.003 10.879 430.569 498.0
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF26-like {2.3.3.70} (TFClass)
TFClass IDTFClass: 2.3.3.70.1
HGNCHGNC:13053
MGI
EntrezGene (human)GeneID:7574
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZNF26_HUMAN
UniProt ID (mouse)
UniProt AC (human)P17031
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01193.04.06.06.0
022.00.00.0207.0
034.01.0202.02.0
0438.026.04.0141.0
056.0187.08.08.0
0627.089.02.091.0
07156.08.037.08.0
0838.012.0137.022.0
0928.0149.012.020.0
10184.03.03.019.0
110.086.05.0118.0
12101.048.018.042.0
1320.0130.014.045.0
14186.07.07.09.0
15137.012.046.014.0
1627.051.05.0126.0
1745.0136.012.016.0
18140.021.040.08.0
19173.09.025.02.0
20167.022.09.011.0
21180.01.026.02.0
22180.014.04.011.0
238.02.03.0196.0
PFM
ACGT
010.9230.0190.0290.029
020.010.00.00.99
030.0190.0050.9670.01
040.1820.1240.0190.675
050.0290.8950.0380.038
060.1290.4260.010.435
070.7460.0380.1770.038
080.1820.0570.6560.105
090.1340.7130.0570.096
100.880.0140.0140.091
110.00.4110.0240.565
120.4830.230.0860.201
130.0960.6220.0670.215
140.890.0330.0330.043
150.6560.0570.220.067
160.1290.2440.0240.603
170.2150.6510.0570.077
180.670.10.1910.038
190.8280.0430.120.01
200.7990.1050.0430.053
210.8610.0050.1240.01
220.8610.0670.0190.053
230.0380.010.0140.938
PWM
ACGT
011.288-2.307-1.989-1.989
02-2.777-3.692-3.6921.358
03-2.307-3.1331.334-2.777
04-0.309-0.673-2.3070.977
05-1.9891.257-1.747-1.747
06-0.6370.522-2.7770.544
071.077-1.747-0.335-1.747
08-0.309-1.3910.948-0.831
09-0.6021.032-1.391-0.921
101.241-2.514-2.514-0.969
11-3.6920.488-2.1350.801
120.647-0.083-1.019-0.212
13-0.9210.896-1.251-0.145
141.252-1.861-1.861-1.646
150.948-1.391-0.124-1.251
16-0.637-0.024-2.1350.866
17-0.1450.941-1.391-1.129
180.97-0.875-0.26-1.747
191.18-1.646-0.71-2.777
201.145-0.831-1.646-1.469
211.219-3.133-0.673-2.777
221.219-1.251-2.307-1.469
23-1.747-2.777-2.5141.304
Standard thresholds
P-value Threshold
0.001 0.48236
0.0005 1.80121
0.0001 4.61876