MotifZNF24.H12INVITRO.0.P.D
Gene (human)ZNF24
(GeneCards)
Gene synonyms (human)KOX17, ZNF191, ZSCAN3
Gene (mouse)Znf24
Gene synonyms (mouse)Hmcns, Zfp191, Zfp24
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length14
ConsensusTGAATGAATGAATG
GC content31.48%
Information content (bits; total / per base)21.534 / 1.538
Data sourcesChIP-Seq
Aligned words597

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 9 (62) 0.799 0.974 0.743 0.95 0.776 0.983 6.082 9.835 126.432 325.086
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF24-like {2.3.3.10} (TFClass)
TFClass IDTFClass: 2.3.3.10.1
HGNCHGNC:13032
MGIMGI:1929704
EntrezGene (human)GeneID:7572
(SSTAR profile)
EntrezGene (mouse)GeneID:59057
(SSTAR profile)
UniProt ID (human)ZNF24_HUMAN
UniProt ID (mouse)ZNF24_MOUSE
UniProt AC (human)P17028
(TFClass)
UniProt AC (mouse)Q91VN1
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 9 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0116.02.063.0516.0
029.02.0582.04.0
03581.03.05.08.0
04566.02.06.023.0
052.050.025.0520.0
0657.04.0523.013.0
07597.00.00.00.0
08557.03.036.01.0
099.013.03.0572.0
106.013.0574.04.0
11552.037.05.03.0
12488.016.065.028.0
1316.07.044.0530.0
143.019.0529.046.0
PFM
ACGT
010.0270.0030.1060.864
020.0150.0030.9750.007
030.9730.0050.0080.013
040.9480.0030.010.039
050.0030.0840.0420.871
060.0950.0070.8760.022
071.00.00.00.0
080.9330.0050.060.002
090.0150.0220.0050.958
100.010.0220.9610.007
110.9250.0620.0080.005
120.8170.0270.1090.047
130.0270.0120.0740.888
140.0050.0320.8860.077
PWM
ACGT
01-2.148-3.736-0.8481.233
02-2.656-3.7361.353-3.294
031.351-3.491-3.13-2.755
041.325-3.736-2.988-1.814
05-3.736-1.073-1.7351.241
06-0.946-3.2941.246-2.335
071.378-4.548-4.548-4.548
081.309-3.491-1.389-4.062
09-2.656-2.335-3.4911.336
10-2.988-2.3351.339-3.294
111.3-1.363-3.13-3.491
121.177-2.148-0.818-1.629
13-2.148-2.865-1.1961.26
14-3.491-1.9911.258-1.153
Standard thresholds
P-value Threshold
0.001 -0.54394
0.0005 0.94016
0.0001 4.09391