| Motif | ZNF2.H12RSNP.0.P.D |
| Gene (human) | ZNF2 (GeneCards) |
| Gene synonyms (human) | ZNF661 |
| Gene (mouse) | Znf2 |
| Gene synonyms (mouse) | Zfp661 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ZNF2.H12RSNP.0.P.D |
| Gene (human) | ZNF2 (GeneCards) |
| Gene synonyms (human) | ZNF661 |
| Gene (mouse) | Znf2 |
| Gene synonyms (mouse) | Zfp661 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 10 |
| Consensus | CAGYKCChYC |
| GC content | 74.79% |
| Information content (bits; total / per base) | 10.53 / 1.053 |
| Data sources | ChIP-Seq |
| Aligned words | 1014 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (10) | 0.713 | 0.764 | 0.6 | 0.633 | 0.659 | 0.759 | 1.983 | 2.466 | 34.747 | 97.77 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF302-like {2.3.3.44} (TFClass) |
| TFClass ID | TFClass: 2.3.3.44.2 |
| HGNC | HGNC:12991 |
| MGI | MGI:1919430 |
| EntrezGene (human) | GeneID:7549 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:72180 (SSTAR profile) |
| UniProt ID (human) | ZNF2_HUMAN |
| UniProt ID (mouse) | ZNF2_MOUSE |
| UniProt AC (human) | Q9BSG1 (TFClass) |
| UniProt AC (mouse) | Q8BIQ3 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZNF2.H12RSNP.0.P.D.pcm |
| PWM | ZNF2.H12RSNP.0.P.D.pwm |
| PFM | ZNF2.H12RSNP.0.P.D.pfm |
| Alignment | ZNF2.H12RSNP.0.P.D.words.tsv |
| Threshold to P-value map | ZNF2.H12RSNP.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZNF2.H12RSNP.0.P.D_jaspar_format.txt |
| MEME format | ZNF2.H12RSNP.0.P.D_meme_format.meme |
| Transfac format | ZNF2.H12RSNP.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 47.0 | 946.0 | 5.0 | 16.0 |
| 02 | 827.0 | 28.0 | 22.0 | 137.0 |
| 03 | 17.0 | 97.0 | 882.0 | 18.0 |
| 04 | 22.0 | 782.0 | 44.0 | 166.0 |
| 05 | 122.0 | 52.0 | 660.0 | 180.0 |
| 06 | 71.0 | 832.0 | 82.0 | 29.0 |
| 07 | 34.0 | 954.0 | 5.0 | 21.0 |
| 08 | 487.0 | 313.0 | 98.0 | 116.0 |
| 09 | 20.0 | 737.0 | 92.0 | 165.0 |
| 10 | 32.0 | 886.0 | 67.0 | 29.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.046 | 0.933 | 0.005 | 0.016 |
| 02 | 0.816 | 0.028 | 0.022 | 0.135 |
| 03 | 0.017 | 0.096 | 0.87 | 0.018 |
| 04 | 0.022 | 0.771 | 0.043 | 0.164 |
| 05 | 0.12 | 0.051 | 0.651 | 0.178 |
| 06 | 0.07 | 0.821 | 0.081 | 0.029 |
| 07 | 0.034 | 0.941 | 0.005 | 0.021 |
| 08 | 0.48 | 0.309 | 0.097 | 0.114 |
| 09 | 0.02 | 0.727 | 0.091 | 0.163 |
| 10 | 0.032 | 0.874 | 0.066 | 0.029 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.656 | 1.312 | -3.636 | -2.667 |
| 02 | 1.178 | -2.15 | -2.375 | -0.61 |
| 03 | -2.612 | -0.95 | 1.242 | -2.56 |
| 04 | -2.375 | 1.122 | -1.719 | -0.42 |
| 05 | -0.724 | -1.558 | 0.953 | -0.34 |
| 06 | -1.255 | 1.184 | -1.115 | -2.117 |
| 07 | -1.966 | 1.32 | -3.636 | -2.418 |
| 08 | 0.65 | 0.21 | -0.94 | -0.774 |
| 09 | -2.463 | 1.063 | -1.002 | -0.426 |
| 10 | -2.024 | 1.247 | -1.312 | -2.117 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.577315 |
| 0.0005 | 5.463365 |
| 0.0001 | 7.28272 |