MotifZNF2.H12CORE.0.P.B
Gene (human)ZNF2
(GeneCards)
Gene synonyms (human)ZNF661
Gene (mouse)Znf2
Gene synonyms (mouse)Zfp661
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length10
ConsensusCAGYKCChYC
GC content74.79%
Information content (bits; total / per base)10.53 / 1.053
Data sourcesChIP-Seq
Aligned words1014

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (10) 0.713 0.764 0.6 0.633 0.659 0.759 1.983 2.466 34.747 97.77
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF302-like {2.3.3.44} (TFClass)
TFClass IDTFClass: 2.3.3.44.2
HGNCHGNC:12991
MGIMGI:1919430
EntrezGene (human)GeneID:7549
(SSTAR profile)
EntrezGene (mouse)GeneID:72180
(SSTAR profile)
UniProt ID (human)ZNF2_HUMAN
UniProt ID (mouse)ZNF2_MOUSE
UniProt AC (human)Q9BSG1
(TFClass)
UniProt AC (mouse)Q8BIQ3
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0147.0946.05.016.0
02827.028.022.0137.0
0317.097.0882.018.0
0422.0782.044.0166.0
05122.052.0660.0180.0
0671.0832.082.029.0
0734.0954.05.021.0
08487.0313.098.0116.0
0920.0737.092.0165.0
1032.0886.067.029.0
PFM
ACGT
010.0460.9330.0050.016
020.8160.0280.0220.135
030.0170.0960.870.018
040.0220.7710.0430.164
050.120.0510.6510.178
060.070.8210.0810.029
070.0340.9410.0050.021
080.480.3090.0970.114
090.020.7270.0910.163
100.0320.8740.0660.029
PWM
ACGT
01-1.6561.312-3.636-2.667
021.178-2.15-2.375-0.61
03-2.612-0.951.242-2.56
04-2.3751.122-1.719-0.42
05-0.724-1.5580.953-0.34
06-1.2551.184-1.115-2.117
07-1.9661.32-3.636-2.418
080.650.21-0.94-0.774
09-2.4631.063-1.002-0.426
10-2.0241.247-1.312-2.117
Standard thresholds
P-value Threshold
0.001 4.577315
0.0005 5.463365
0.0001 7.28272