MotifZNF16.H12INVITRO.0.P.D
Gene (human)ZNF16
(GeneCards)
Gene synonyms (human)HZF1, KOX9
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusdCCYKChRTGGCTCCChvbKdCY
GC content60.75%
Information content (bits; total / per base)23.283 / 1.012
Data sourcesChIP-Seq
Aligned words807

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.956 0.992 0.948 0.988 0.96 0.994 10.332 12.1 500.268 584.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.204
HGNCHGNC:12947
MGI
EntrezGene (human)GeneID:7564
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZNF16_HUMAN
UniProt ID (mouse)
UniProt AC (human)P17020
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01461.080.0177.089.0
0227.0660.028.092.0
0367.0645.010.085.0
0474.0272.027.0434.0
0541.097.0137.0532.0
0615.0736.017.039.0
07160.0422.021.0204.0
08518.060.0190.039.0
098.023.025.0751.0
1097.07.0688.015.0
1129.018.0749.011.0
125.0786.02.014.0
135.04.01.0797.0
141.0777.020.09.0
1525.0755.011.016.0
163.0783.01.020.0
17204.0269.021.0313.0
18467.0179.098.063.0
1922.0257.0201.0327.0
2026.068.0100.0613.0
21136.0122.0423.0126.0
2235.0687.021.064.0
2342.0586.015.0164.0
PFM
ACGT
010.5710.0990.2190.11
020.0330.8180.0350.114
030.0830.7990.0120.105
040.0920.3370.0330.538
050.0510.120.170.659
060.0190.9120.0210.048
070.1980.5230.0260.253
080.6420.0740.2350.048
090.010.0290.0310.931
100.120.0090.8530.019
110.0360.0220.9280.014
120.0060.9740.0020.017
130.0060.0050.0010.988
140.0010.9630.0250.011
150.0310.9360.0140.02
160.0040.970.0010.025
170.2530.3330.0260.388
180.5790.2220.1210.078
190.0270.3180.2490.405
200.0320.0840.1240.76
210.1690.1510.5240.156
220.0430.8510.0260.079
230.0520.7260.0190.203
PWM
ACGT
010.822-0.913-0.13-0.808
02-1.9591.179-1.925-0.775
03-1.0861.157-2.858-0.853
04-0.9890.297-1.9590.762
05-1.562-0.723-0.3830.964
06-2.5011.288-2.388-1.61
07-0.230.734-2.1940.011
080.938-1.193-0.059-1.61
09-3.046-2.11-2.0321.308
10-0.723-3.1551.221-2.501
11-1.892-2.3361.306-2.776
12-3.4171.354-4.014-2.563
13-3.417-3.58-4.3321.368
14-4.3321.342-2.239-2.948
15-2.0321.314-2.776-2.443
16-3.7731.35-4.332-2.239
170.0110.286-2.1940.436
180.835-0.119-0.713-1.146
19-2.1510.24-0.0040.48
20-1.995-1.071-0.6941.106
21-0.39-0.4980.736-0.466
22-1.7131.219-2.194-1.131
23-1.5391.061-2.501-0.205
Standard thresholds
P-value Threshold
0.001 -0.79699
0.0005 0.65536
0.0001 3.75396