MotifZNF10.H12INVIVO.0.P.C
Gene (human)ZNF10
(GeneCards)
Gene synonyms (human)KOX1
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusRAYCCCTWCCTCACACCWTAYRY
GC content50.5%
Information content (bits; total / per base)31.361 / 1.364
Data sourcesChIP-Seq
Aligned words902

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.982 0.987 0.982 0.985 0.983 0.988 17.177 17.229 474.869 484.201
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.118
HGNCHGNC:12879
MGI
EntrezGene (human)GeneID:7556
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZNF10_HUMAN
UniProt ID (mouse)
UniProt AC (human)P21506
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01209.027.0632.034.0
02795.047.031.029.0
0322.0497.019.0364.0
041.0869.06.026.0
055.0877.02.018.0
0632.0735.04.0131.0
0731.015.011.0845.0
08633.043.057.0169.0
097.0866.00.029.0
100.0902.00.00.0
111.06.00.0895.0
120.0851.02.049.0
13897.00.03.02.0
1413.0862.01.026.0
15843.07.028.024.0
1611.0823.025.043.0
173.0862.01.036.0
18722.055.032.093.0
1929.0108.011.0754.0
20799.022.033.048.0
2137.0254.032.0579.0
22721.047.083.051.0
2374.0629.059.0140.0
PFM
ACGT
010.2320.030.7010.038
020.8810.0520.0340.032
030.0240.5510.0210.404
040.0010.9630.0070.029
050.0060.9720.0020.02
060.0350.8150.0040.145
070.0340.0170.0120.937
080.7020.0480.0630.187
090.0080.960.00.032
100.01.00.00.0
110.0010.0070.00.992
120.00.9430.0020.054
130.9940.00.0030.002
140.0140.9560.0010.029
150.9350.0080.0310.027
160.0120.9120.0280.048
170.0030.9560.0010.04
180.80.0610.0350.103
190.0320.120.0120.836
200.8860.0240.0370.053
210.0410.2820.0350.642
220.7990.0520.0920.057
230.0820.6970.0650.155
PWM
ACGT
01-0.075-2.0691.026-1.851
021.255-1.54-1.938-2.002
03-2.260.786-2.3960.476
04-4.4321.343-3.384-2.104
05-3.5241.353-4.117-2.445
06-1.9081.176-3.685-0.538
07-1.938-2.61-2.8841.316
081.027-1.626-1.353-0.286
09-3.2621.34-4.895-2.002
10-4.8951.381-4.895-4.895
11-4.432-3.384-4.8951.373
12-4.8951.323-4.117-1.5
131.375-4.895-3.878-4.117
14-2.7381.335-4.432-2.104
151.313-3.262-2.035-2.179
16-2.8841.289-2.141-1.626
17-3.8781.335-4.432-1.796
181.159-1.388-1.908-0.875
19-2.002-0.728-2.8841.202
201.26-2.26-1.879-1.52
21-1.770.118-1.9080.938
221.157-1.54-0.987-1.461
23-1.0991.021-1.32-0.472
Standard thresholds
P-value Threshold
0.001 -7.07189
0.0005 -5.20849
0.0001 -1.21749