| Motif | ZN879.H12INVIVO.0.P.C |
| Gene (human) | ZNF879 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf879 |
| Gene synonyms (mouse) | Zfp879 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | ZN879.H12INVIVO.0.P.C |
| Gene (human) | ZNF879 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf879 |
| Gene synonyms (mouse) | Zfp879 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 31 |
| Consensus | hdYKdRGdvCAhdTWYRTTYWndWKTRYTWW |
| GC content | 30.95% |
| Information content (bits; total / per base) | 22.15 / 0.715 |
| Data sources | ChIP-Seq |
| Aligned words | 995 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (4) | 0.856 | 0.87 | 0.82 | 0.832 | 0.92 | 0.926 | 10.647 | 10.844 | 294.038 | 301.237 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.157 |
| HGNC | HGNC:37273 |
| MGI | MGI:3053099 |
| EntrezGene (human) | GeneID:345462 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:214779 (SSTAR profile) |
| UniProt ID (human) | ZN879_HUMAN |
| UniProt ID (mouse) | ZN879_MOUSE |
| UniProt AC (human) | B4DU55 (TFClass) |
| UniProt AC (mouse) | Q8BI99 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN879.H12INVIVO.0.P.C.pcm |
| PWM | ZN879.H12INVIVO.0.P.C.pwm |
| PFM | ZN879.H12INVIVO.0.P.C.pfm |
| Alignment | ZN879.H12INVIVO.0.P.C.words.tsv |
| Threshold to P-value map | ZN879.H12INVIVO.0.P.C.thr |
| Motif in other formats | |
| JASPAR format | ZN879.H12INVIVO.0.P.C_jaspar_format.txt |
| MEME format | ZN879.H12INVIVO.0.P.C_meme_format.meme |
| Transfac format | ZN879.H12INVIVO.0.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 142.0 | 147.0 | 139.0 | 567.0 |
| 02 | 312.0 | 88.0 | 464.0 | 131.0 |
| 03 | 90.0 | 105.0 | 89.0 | 711.0 |
| 04 | 46.0 | 64.0 | 121.0 | 764.0 |
| 05 | 230.0 | 54.0 | 217.0 | 494.0 |
| 06 | 218.0 | 22.0 | 649.0 | 106.0 |
| 07 | 52.0 | 34.0 | 800.0 | 109.0 |
| 08 | 130.0 | 83.0 | 213.0 | 569.0 |
| 09 | 132.0 | 237.0 | 559.0 | 67.0 |
| 10 | 19.0 | 900.0 | 11.0 | 65.0 |
| 11 | 840.0 | 48.0 | 38.0 | 69.0 |
| 12 | 81.0 | 81.0 | 49.0 | 784.0 |
| 13 | 462.0 | 99.0 | 177.0 | 257.0 |
| 14 | 62.0 | 75.0 | 39.0 | 819.0 |
| 15 | 770.0 | 33.0 | 75.0 | 117.0 |
| 16 | 78.0 | 161.0 | 138.0 | 618.0 |
| 17 | 382.0 | 56.0 | 492.0 | 65.0 |
| 18 | 23.0 | 68.0 | 37.0 | 867.0 |
| 19 | 50.0 | 40.0 | 79.0 | 826.0 |
| 20 | 64.0 | 336.0 | 61.0 | 534.0 |
| 21 | 716.0 | 67.0 | 50.0 | 162.0 |
| 22 | 265.0 | 223.0 | 165.0 | 342.0 |
| 23 | 298.0 | 35.0 | 162.0 | 500.0 |
| 24 | 565.0 | 33.0 | 132.0 | 265.0 |
| 25 | 79.0 | 90.0 | 115.0 | 711.0 |
| 26 | 14.0 | 9.0 | 20.0 | 952.0 |
| 27 | 213.0 | 24.0 | 565.0 | 193.0 |
| 28 | 40.0 | 193.0 | 125.0 | 637.0 |
| 29 | 83.0 | 13.0 | 39.0 | 860.0 |
| 30 | 628.0 | 25.0 | 164.0 | 178.0 |
| 31 | 96.0 | 73.0 | 46.0 | 780.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.143 | 0.148 | 0.14 | 0.57 |
| 02 | 0.314 | 0.088 | 0.466 | 0.132 |
| 03 | 0.09 | 0.106 | 0.089 | 0.715 |
| 04 | 0.046 | 0.064 | 0.122 | 0.768 |
| 05 | 0.231 | 0.054 | 0.218 | 0.496 |
| 06 | 0.219 | 0.022 | 0.652 | 0.107 |
| 07 | 0.052 | 0.034 | 0.804 | 0.11 |
| 08 | 0.131 | 0.083 | 0.214 | 0.572 |
| 09 | 0.133 | 0.238 | 0.562 | 0.067 |
| 10 | 0.019 | 0.905 | 0.011 | 0.065 |
| 11 | 0.844 | 0.048 | 0.038 | 0.069 |
| 12 | 0.081 | 0.081 | 0.049 | 0.788 |
| 13 | 0.464 | 0.099 | 0.178 | 0.258 |
| 14 | 0.062 | 0.075 | 0.039 | 0.823 |
| 15 | 0.774 | 0.033 | 0.075 | 0.118 |
| 16 | 0.078 | 0.162 | 0.139 | 0.621 |
| 17 | 0.384 | 0.056 | 0.494 | 0.065 |
| 18 | 0.023 | 0.068 | 0.037 | 0.871 |
| 19 | 0.05 | 0.04 | 0.079 | 0.83 |
| 20 | 0.064 | 0.338 | 0.061 | 0.537 |
| 21 | 0.72 | 0.067 | 0.05 | 0.163 |
| 22 | 0.266 | 0.224 | 0.166 | 0.344 |
| 23 | 0.299 | 0.035 | 0.163 | 0.503 |
| 24 | 0.568 | 0.033 | 0.133 | 0.266 |
| 25 | 0.079 | 0.09 | 0.116 | 0.715 |
| 26 | 0.014 | 0.009 | 0.02 | 0.957 |
| 27 | 0.214 | 0.024 | 0.568 | 0.194 |
| 28 | 0.04 | 0.194 | 0.126 | 0.64 |
| 29 | 0.083 | 0.013 | 0.039 | 0.864 |
| 30 | 0.631 | 0.025 | 0.165 | 0.179 |
| 31 | 0.096 | 0.073 | 0.046 | 0.784 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.555 | -0.521 | -0.577 | 0.82 |
| 02 | 0.225 | -1.027 | 0.62 | -0.635 |
| 03 | -1.005 | -0.853 | -1.016 | 1.046 |
| 04 | -1.658 | -1.338 | -0.713 | 1.117 |
| 05 | -0.078 | -1.503 | -0.136 | 0.683 |
| 06 | -0.131 | -2.357 | 0.955 | -0.844 |
| 07 | -1.539 | -1.947 | 1.163 | -0.816 |
| 08 | -0.643 | -1.084 | -0.154 | 0.824 |
| 09 | -0.628 | -0.048 | 0.806 | -1.293 |
| 10 | -2.492 | 1.281 | -2.98 | -1.323 |
| 11 | 1.212 | -1.617 | -1.841 | -1.265 |
| 12 | -1.108 | -1.108 | -1.597 | 1.143 |
| 13 | 0.616 | -0.911 | -0.338 | 0.032 |
| 14 | -1.369 | -1.183 | -1.817 | 1.187 |
| 15 | 1.125 | -1.976 | -1.183 | -0.747 |
| 16 | -1.145 | -0.431 | -0.584 | 0.906 |
| 17 | 0.427 | -1.468 | 0.679 | -1.323 |
| 18 | -2.316 | -1.279 | -1.867 | 1.244 |
| 19 | -1.577 | -1.792 | -1.132 | 1.195 |
| 20 | -1.338 | 0.299 | -1.385 | 0.76 |
| 21 | 1.053 | -1.293 | -1.577 | -0.425 |
| 22 | 0.063 | -0.108 | -0.407 | 0.316 |
| 23 | 0.18 | -1.92 | -0.425 | 0.695 |
| 24 | 0.817 | -1.976 | -0.628 | 0.063 |
| 25 | -1.132 | -1.005 | -0.764 | 1.046 |
| 26 | -2.768 | -3.151 | -2.445 | 1.337 |
| 27 | -0.154 | -2.276 | 0.817 | -0.252 |
| 28 | -1.792 | -0.252 | -0.681 | 0.936 |
| 29 | -1.084 | -2.834 | -1.817 | 1.236 |
| 30 | 0.922 | -2.238 | -0.413 | -0.332 |
| 31 | -0.941 | -1.21 | -1.658 | 1.138 |
| P-value | Threshold |
|---|---|
| 0.001 | 0.94266 |
| 0.0005 | 2.17861 |
| 0.0001 | 4.83251 |