MotifZN823.H12CORE.0.P.C
Gene (human)ZNF823
(GeneCards)
Gene synonyms (human)ZFP36
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusRMvRRvRRdRdKGMRRnAGAGAA
GC content47.78%
Information content (bits; total / per base)20.011 / 0.87
Data sourcesChIP-Seq
Aligned words932

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.879 0.901 0.804 0.837 0.887 0.901 6.94 7.129 227.581 259.268
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF442-like {2.3.3.74} (TFClass)
TFClass IDTFClass: 2.3.3.74.2
HGNCHGNC:30936
MGI
EntrezGene (human)GeneID:55552
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN823_HUMAN
UniProt ID (mouse)
UniProt AC (human)P16415
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01270.025.0610.027.0
02676.0145.087.024.0
03212.0388.0300.032.0
04677.024.0213.018.0
05202.0146.0552.032.0
06374.0117.0370.071.0
07202.017.0681.032.0
08263.012.0628.029.0
09284.049.0431.0168.0
10576.020.0206.0130.0
11234.038.0184.0476.0
12151.010.0295.0476.0
1351.019.0841.021.0
14355.0495.043.039.0
15592.010.0317.013.0
16516.011.0373.032.0
17180.0242.0224.0286.0
18776.01.0128.027.0
1931.08.0875.018.0
20905.08.014.05.0
2126.01.0902.03.0
22898.010.014.010.0
23768.018.0141.05.0
PFM
ACGT
010.290.0270.6550.029
020.7250.1560.0930.026
030.2270.4160.3220.034
040.7260.0260.2290.019
050.2170.1570.5920.034
060.4010.1260.3970.076
070.2170.0180.7310.034
080.2820.0130.6740.031
090.3050.0530.4620.18
100.6180.0210.2210.139
110.2510.0410.1970.511
120.1620.0110.3170.511
130.0550.020.9020.023
140.3810.5310.0460.042
150.6350.0110.340.014
160.5540.0120.40.034
170.1930.260.240.307
180.8330.0010.1370.029
190.0330.0090.9390.019
200.9710.0090.0150.005
210.0280.0010.9680.003
220.9640.0110.0150.011
230.8240.0190.1510.005
PWM
ACGT
010.146-2.1730.958-2.101
021.06-0.47-0.973-2.211
03-0.0940.5070.251-1.941
041.062-2.211-0.089-2.477
05-0.142-0.4630.858-1.941
060.47-0.6820.46-1.172
07-0.142-2.5291.068-1.941
080.12-2.840.987-2.034
090.197-1.5320.612-0.324
100.901-2.381-0.122-0.578
110.004-1.777-0.2340.711
12-0.43-2.9980.2340.711
13-1.494-2.4281.278-2.336
140.4190.75-1.658-1.752
150.928-2.9980.306-2.77
160.791-2.9160.468-1.941
17-0.2560.038-0.0390.204
181.198-4.462-0.593-2.101
19-1.971-3.1851.318-2.477
201.351-3.185-2.704-3.555
21-2.137-4.4621.348-3.909
221.344-2.998-2.704-2.998
231.188-2.477-0.498-3.555
Standard thresholds
P-value Threshold
0.001 0.71151
0.0005 2.07586
0.0001 4.96506