MotifZN793.H12INVIVO.1.P.C
Gene (human)ZNF793
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length15
ConsensusbbCTTGGGGCTCbbd
GC content58.52%
Information content (bits; total / per base)15.0 / 1.0
Data sourcesChIP-Seq
Aligned words1003

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (8) 0.968 0.972 0.938 0.95 0.96 0.962 5.172 5.211 655.444 715.066
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.16
HGNCHGNC:33115
MGI
EntrezGene (human)GeneID:390927
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN793_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q6ZN11
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0187.0184.0274.0458.0
02120.0148.0567.0168.0
038.0880.025.090.0
040.051.01.0951.0
0536.085.072.0810.0
062.00.0996.05.0
0735.015.0911.042.0
0877.055.0816.055.0
09209.04.0774.016.0
101.0624.03.0375.0
111.05.00.0997.0
120.0865.00.0138.0
13103.0247.0201.0452.0
14112.0128.0448.0315.0
15178.0110.0315.0400.0
PFM
ACGT
010.0870.1830.2730.457
020.120.1480.5650.167
030.0080.8770.0250.09
040.00.0510.0010.948
050.0360.0850.0720.808
060.0020.00.9930.005
070.0350.0150.9080.042
080.0770.0550.8140.055
090.2080.0040.7720.016
100.0010.6220.0030.374
110.0010.0050.00.994
120.00.8620.00.138
130.1030.2460.20.451
140.1120.1280.4470.314
150.1770.110.3140.399
PWM
ACGT
01-1.046-0.3070.0880.599
02-0.73-0.5230.812-0.397
03-3.2561.251-2.246-1.012
04-4.985-1.566-4.5281.328
05-1.901-1.069-1.2311.168
06-4.216-4.9851.374-3.625
07-1.928-2.7141.285-1.753
08-1.165-1.4931.175-1.493
09-0.181-3.7861.122-2.656
10-4.5280.908-3.9780.4
11-4.528-3.625-4.9851.375
12-4.9851.233-4.985-0.592
13-0.88-0.015-0.2190.586
14-0.798-0.6660.5770.227
15-0.34-0.8150.2270.464
Standard thresholds
P-value Threshold
0.001 2.76951
0.0005 4.02651
0.0001 6.60076