ZN791.H12INVITRO.0.P.D motif - HOmo sapiens COmprehensive MOdel COllection

Motif	ZN791.H12INVITRO.0.P.D
Gene (human)	ZNF791 (GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype	0
Quality	D

Motif length	23
Consensus	YYYWTKTATKTRWTWAKTYRYTT
GC content	22.32%
Information content (bits; total / per base)	26.443 / 1.15
Data sources	ChIP-Seq
Aligned words	425

ChIP-Seq benchmarking	Num. of experiments (peaksets)	auROC, median	auROC, best	auPRC, median	auPRC, best	pseudo-auROC, median	pseudo-auROC, best	pseudo-log-auROC, median	pseudo-log-auROC, best	Centrality, median	Centrality, best
Human	1 (7)	0.847	0.911	0.844	0.897	0.918	0.986	9.547	12.109	387.638	458.444

TF superclass	Zinc-coordinating DNA-binding domains {2} (TFClass)
TF class	C2H2 zinc finger factors {2.3} (TFClass)
TF family	More than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamily	Unclassified {2.3.3.0} (TFClass)
TFClass ID	TFClass: 2.3.3.0.209
HGNC	HGNC:26895
MGI
EntrezGene (human)	GeneID:163049 (SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)	ZN791_HUMAN
UniProt ID (mouse)
UniProt AC (human)	Q3KP31 (TFClass)
UniProt AC (mouse)
GRECO-DB-TF	yes

ChIP-Seq	1 human, 0 mouse
HT-SELEX	0
Methyl-HT-SELEX	0

PCM	ZN791.H12INVITRO.0.P.D.pcm
PWM	ZN791.H12INVITRO.0.P.D.pwm
PFM	ZN791.H12INVITRO.0.P.D.pfm
Alignment	ZN791.H12INVITRO.0.P.D.words.tsv
Threshold to P-value map	ZN791.H12INVITRO.0.P.D.thr
Motif in other formats
JASPAR format	ZN791.H12INVITRO.0.P.D_jaspar_format.txt
MEME format	ZN791.H12INVITRO.0.P.D_meme_format.meme
Transfac format	ZN791.H12INVITRO.0.P.D_transfac_format.txt
Homer format	ZN791.H12INVITRO.0.P.D_homer_format_0.001.txt ZN791.H12INVITRO.0.P.D_homer_format_0.0005.txt ZN791.H12INVITRO.0.P.D_homer_format_0.0001.txt

PCM

	A	C	G	T
01	1.0	252.0	1.0	171.0
02	3.0	225.0	0.0	197.0
03	13.0	197.0	0.0	215.0
04	180.0	34.0	1.0	210.0
05	4.0	3.0	1.0	417.0
06	39.0	0.0	200.0	186.0
07	0.0	2.0	2.0	421.0
08	415.0	0.0	8.0	2.0
09	2.0	9.0	3.0	411.0
10	24.0	2.0	213.0	186.0
11	2.0	2.0	4.0	417.0
12	234.0	1.0	182.0	8.0
13	232.0	2.0	5.0	186.0
14	9.0	98.0	4.0	314.0
15	112.0	7.0	73.0	233.0
16	326.0	0.0	5.0	94.0
17	16.0	6.0	213.0	190.0
18	40.0	14.0	2.0	369.0
19	3.0	144.0	2.0	276.0
20	302.0	9.0	67.0	47.0
21	3.0	160.0	10.0	252.0
22	7.0	5.0	2.0	411.0
23	3.0	11.0	1.0	410.0

PFM

	A	C	G	T
01	0.002	0.593	0.002	0.402
02	0.007	0.529	0.0	0.464
03	0.031	0.464	0.0	0.506
04	0.424	0.08	0.002	0.494
05	0.009	0.007	0.002	0.981
06	0.092	0.0	0.471	0.438
07	0.0	0.005	0.005	0.991
08	0.976	0.0	0.019	0.005
09	0.005	0.021	0.007	0.967
10	0.056	0.005	0.501	0.438
11	0.005	0.005	0.009	0.981
12	0.551	0.002	0.428	0.019
13	0.546	0.005	0.012	0.438
14	0.021	0.231	0.009	0.739
15	0.264	0.016	0.172	0.548
16	0.767	0.0	0.012	0.221
17	0.038	0.014	0.501	0.447
18	0.094	0.033	0.005	0.868
19	0.007	0.339	0.005	0.649
20	0.711	0.021	0.158	0.111
21	0.007	0.376	0.024	0.593
22	0.016	0.012	0.005	0.967
23	0.007	0.026	0.002	0.965

PWM

	A	C	G	T
01	-3.758	0.855	-3.758	0.471
02	-3.173	0.743	-4.266	0.611
03	-2.005	0.611	-4.266	0.698
04	0.521	-1.11	-3.758	0.674
05	-2.973	-3.173	-3.758	1.357
06	-0.978	-4.266	0.626	0.554
07	-4.266	-3.423	-3.423	1.366
08	1.352	-4.266	-2.427	-3.423
09	-3.423	-2.327	-3.173	1.342
10	-1.441	-3.423	0.688	0.554
11	-3.423	-3.423	-2.973	1.357
12	0.782	-3.758	0.532	-2.427
13	0.773	-3.423	-2.806	0.554
14	-2.327	-0.08	-2.973	1.074
15	0.052	-2.538	-0.369	0.778
16	1.112	-4.266	-2.806	-0.121
17	-1.817	-2.663	0.688	0.575
18	-0.954	-1.938	-3.423	1.235
19	-3.173	0.3	-3.423	0.946
20	1.035	-2.327	-0.453	-0.798
21	-3.173	0.405	-2.236	0.855
22	-2.538	-2.806	-3.423	1.342
23	-3.173	-2.153	-3.758	1.34

Standard thresholds

P-value	Threshold
0.001	-4.14309
0.0005	-2.38744
0.0001	1.34821