MotifZN790.H12INVITRO.0.P.D
Gene (human)ZNF790
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusKvRvdGCTYYChnhnvhYbYYhn
GC content49.67%
Information content (bits; total / per base)12.526 / 0.545
Data sourcesChIP-Seq
Aligned words120

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.769 0.769 0.627 0.627 0.828 0.828 5.203 5.203 19.886 19.886
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.158
HGNCHGNC:33114
MGI
EntrezGene (human)GeneID:388536
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN790_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q6PG37
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
015.011.015.089.0
0263.034.014.09.0
0376.016.025.03.0
0441.056.020.03.0
0547.012.018.043.0
066.04.097.013.0
0726.089.03.02.0
081.03.00.0116.0
090.060.06.054.0
106.081.03.030.0
115.0101.03.011.0
1244.047.02.027.0
1322.023.035.040.0
1411.049.010.050.0
1513.032.013.062.0
1614.031.066.09.0
1742.032.07.039.0
1816.018.08.078.0
1914.019.048.039.0
201.077.020.022.0
216.050.012.052.0
2262.018.014.026.0
2319.019.050.032.0
PFM
ACGT
010.0420.0920.1250.742
020.5250.2830.1170.075
030.6330.1330.2080.025
040.3420.4670.1670.025
050.3920.10.150.358
060.050.0330.8080.108
070.2170.7420.0250.017
080.0080.0250.00.967
090.00.50.050.45
100.050.6750.0250.25
110.0420.8420.0250.092
120.3670.3920.0170.225
130.1830.1920.2920.333
140.0920.4080.0830.417
150.1080.2670.1080.517
160.1170.2580.550.075
170.350.2670.0580.325
180.1330.150.0670.65
190.1170.1580.40.325
200.0080.6420.1670.183
210.050.4170.10.433
220.5170.150.1170.217
230.1580.1580.4170.267
PWM
ACGT
01-1.616-0.939-0.6551.062
020.7220.121-0.719-1.118
030.906-0.596-0.175-2.006
040.3020.606-0.386-2.006
050.435-0.86-0.4860.348
06-1.467-1.7921.147-0.787
07-0.1371.062-2.006-2.278
08-2.653-2.006-3.2611.324
09-3.2610.674-1.4670.571
10-1.4670.969-2.0060.0
11-1.6161.187-2.006-0.939
120.3710.435-2.278-0.101
13-0.296-0.2540.1490.278
14-0.9390.476-1.0250.495
15-0.7870.062-0.7870.706
16-0.7190.0320.767-1.118
170.3250.062-1.3370.253
18-0.596-0.486-1.2210.932
19-0.719-0.4350.4560.253
20-2.6530.919-0.386-0.296
21-1.4670.495-0.860.534
220.706-0.486-0.719-0.137
23-0.435-0.4350.4950.062
Standard thresholds
P-value Threshold
0.001 4.37301
0.0005 5.24361
0.0001 7.06921