MotifZN789.H12INVITRO.0.P.D
Gene (human)ZNF789
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length20
ConsensusdvTCMCACTYMTGMCACCMv
GC content55.16%
Information content (bits; total / per base)22.545 / 1.127
Data sourcesChIP-Seq
Aligned words548

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (2) 0.964 0.964 0.955 0.955 0.972 0.972 9.736 9.736 255.276 255.276
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.61
HGNCHGNC:27801
MGI
EntrezGene (human)GeneID:285989
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN789_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q5FWF6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01117.054.0243.0134.0
02134.0247.0138.029.0
034.038.04.0502.0
045.0535.05.03.0
05117.0353.010.068.0
0628.0486.03.031.0
07498.025.010.015.0
0816.0484.023.025.0
0940.075.04.0429.0
1025.0131.038.0354.0
1165.0411.045.027.0
1218.047.05.0478.0
130.01.0547.00.0
14382.0104.031.031.0
150.0535.00.013.0
16536.03.02.07.0
170.0542.00.06.0
1828.0509.06.05.0
19308.0111.023.0106.0
20234.0107.0110.097.0
PFM
ACGT
010.2140.0990.4430.245
020.2450.4510.2520.053
030.0070.0690.0070.916
040.0090.9760.0090.005
050.2140.6440.0180.124
060.0510.8870.0050.057
070.9090.0460.0180.027
080.0290.8830.0420.046
090.0730.1370.0070.783
100.0460.2390.0690.646
110.1190.750.0820.049
120.0330.0860.0090.872
130.00.0020.9980.0
140.6970.190.0570.057
150.00.9760.00.024
160.9780.0050.0040.013
170.00.9890.00.011
180.0510.9290.0110.009
190.5620.2030.0420.193
200.4270.1950.2010.177
PWM
ACGT
01-0.156-0.9140.568-0.022
02-0.0220.5840.007-1.511
03-3.213-1.253-3.2131.29
04-3.0481.354-3.048-3.41
05-0.1560.94-2.482-0.689
06-1.5441.258-3.41-1.448
071.282-1.651-2.482-2.123
08-2.0651.254-1.73-1.651
09-1.204-0.593-3.2131.134
10-1.651-0.044-1.2530.942
11-0.7331.091-1.09-1.579
12-1.957-1.048-3.0481.241
13-4.476-3.9851.376-4.476
141.018-0.272-1.448-1.448
15-4.4761.354-4.476-2.252
161.356-3.41-3.657-2.782
17-4.4761.367-4.476-2.906
18-1.5441.304-2.906-3.048
190.804-0.208-1.73-0.253
200.531-0.244-0.217-0.341
Standard thresholds
P-value Threshold
0.001 -0.80374
0.0005 0.69061
0.0001 3.86676