| Motif | ZN787.H12RSNP.1.S.D |
| Gene (human) | ZNF787 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf787 |
| Gene synonyms (mouse) | Zfp787 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | ZN787.H12RSNP.1.S.D |
| Gene (human) | ZNF787 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf787 |
| Gene synonyms (mouse) | Zfp787 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 12 |
| Consensus | nWGCCTCSAYbn |
| GC content | 57.47% |
| Information content (bits; total / per base) | 12.283 / 1.024 |
| Data sources | HT-SELEX |
| Aligned words | 6578 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 2 experiments | median | 0.971 | 0.959 | 0.915 | 0.901 | 0.822 | 0.813 |
| best | 0.996 | 0.993 | 0.978 | 0.972 | 0.903 | 0.895 | |
| Methyl HT-SELEX, 1 experiments | median | 0.947 | 0.924 | 0.852 | 0.83 | 0.741 | 0.732 |
| best | 0.947 | 0.924 | 0.852 | 0.83 | 0.741 | 0.732 | |
| Non-Methyl HT-SELEX, 1 experiments | median | 0.996 | 0.993 | 0.978 | 0.972 | 0.903 | 0.895 |
| best | 0.996 | 0.993 | 0.978 | 0.972 | 0.903 | 0.895 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Multiple dispersed zinc fingers {2.3.4} (TFClass) |
| TF subfamily | Unclassified {2.3.4.0} (TFClass) |
| TFClass ID | TFClass: 2.3.4.0.46 |
| HGNC | HGNC:26998 |
| MGI | MGI:1914359 |
| EntrezGene (human) | GeneID:126208 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:67109 (SSTAR profile) |
| UniProt ID (human) | ZN787_HUMAN |
| UniProt ID (mouse) | ZN787_MOUSE |
| UniProt AC (human) | Q6DD87 (TFClass) |
| UniProt AC (mouse) | Q8BIF9 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 1 |
| PCM | ZN787.H12RSNP.1.S.D.pcm |
| PWM | ZN787.H12RSNP.1.S.D.pwm |
| PFM | ZN787.H12RSNP.1.S.D.pfm |
| Alignment | ZN787.H12RSNP.1.S.D.words.tsv |
| Threshold to P-value map | ZN787.H12RSNP.1.S.D.thr |
| Motif in other formats | |
| JASPAR format | ZN787.H12RSNP.1.S.D_jaspar_format.txt |
| MEME format | ZN787.H12RSNP.1.S.D_meme_format.meme |
| Transfac format | ZN787.H12RSNP.1.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1332.5 | 2170.5 | 1582.5 | 1492.5 |
| 02 | 1071.75 | 605.75 | 777.75 | 4122.75 |
| 03 | 570.0 | 81.0 | 5834.0 | 93.0 |
| 04 | 11.0 | 6566.0 | 0.0 | 1.0 |
| 05 | 322.0 | 6256.0 | 0.0 | 0.0 |
| 06 | 0.0 | 1.0 | 0.0 | 6577.0 |
| 07 | 0.0 | 6567.0 | 0.0 | 11.0 |
| 08 | 1072.0 | 1273.0 | 4202.0 | 31.0 |
| 09 | 5399.0 | 314.0 | 673.0 | 192.0 |
| 10 | 266.0 | 1261.0 | 424.0 | 4627.0 |
| 11 | 622.0 | 852.0 | 2555.0 | 2549.0 |
| 12 | 1315.0 | 1862.0 | 1506.0 | 1895.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.203 | 0.33 | 0.241 | 0.227 |
| 02 | 0.163 | 0.092 | 0.118 | 0.627 |
| 03 | 0.087 | 0.012 | 0.887 | 0.014 |
| 04 | 0.002 | 0.998 | 0.0 | 0.0 |
| 05 | 0.049 | 0.951 | 0.0 | 0.0 |
| 06 | 0.0 | 0.0 | 0.0 | 1.0 |
| 07 | 0.0 | 0.998 | 0.0 | 0.002 |
| 08 | 0.163 | 0.194 | 0.639 | 0.005 |
| 09 | 0.821 | 0.048 | 0.102 | 0.029 |
| 10 | 0.04 | 0.192 | 0.064 | 0.703 |
| 11 | 0.095 | 0.13 | 0.388 | 0.388 |
| 12 | 0.2 | 0.283 | 0.229 | 0.288 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.21 | 0.277 | -0.038 | -0.097 |
| 02 | -0.427 | -0.996 | -0.747 | 0.918 |
| 03 | -1.057 | -2.985 | 1.265 | -2.851 |
| 04 | -4.826 | 1.383 | -6.619 | -6.244 |
| 05 | -1.625 | 1.335 | -6.619 | -6.619 |
| 06 | -6.619 | -6.244 | -6.619 | 1.385 |
| 07 | -6.619 | 1.384 | -6.619 | -4.826 |
| 08 | -0.427 | -0.256 | 0.937 | -3.904 |
| 09 | 1.188 | -1.65 | -0.892 | -2.138 |
| 10 | -1.815 | -0.265 | -1.352 | 1.034 |
| 11 | -0.97 | -0.656 | 0.44 | 0.438 |
| 12 | -0.223 | 0.124 | -0.088 | 0.142 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.76948 |
| 0.0005 | 5.067875 |
| 0.0001 | 7.35562 |