MotifZN778.H12CORE.0.P.C
Gene (human)ZNF778
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length15
ConsensusRGvRbYGKhGTCYKb
GC content64.23%
Information content (bits; total / per base)11.853 / 0.79
Data sourcesChIP-Seq
Aligned words402

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.787 0.879 0.715 0.803 0.774 0.898 3.162 4.151 229.886 336.222
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyUnclassified {2.3.4.0} (TFClass)
TFClass IDTFClass: 2.3.4.0.63
HGNCHGNC:26479
MGI
EntrezGene (human)GeneID:197320
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN778_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q96MU6
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01108.015.0219.060.0
0211.012.0340.039.0
03170.059.0120.053.0
0469.017.0306.010.0
0523.0145.051.0183.0
067.0285.031.079.0
0738.02.0359.03.0
083.026.0223.0150.0
0960.0159.019.0164.0
1042.05.0345.010.0
1112.020.029.0341.0
125.0379.07.011.0
1322.086.025.0269.0
1422.026.0248.0106.0
1518.0156.0159.069.0
PFM
ACGT
010.2690.0370.5450.149
020.0270.030.8460.097
030.4230.1470.2990.132
040.1720.0420.7610.025
050.0570.3610.1270.455
060.0170.7090.0770.197
070.0950.0050.8930.007
080.0070.0650.5550.373
090.1490.3960.0470.408
100.1040.0120.8580.025
110.030.050.0720.848
120.0120.9430.0170.027
130.0550.2140.0620.669
140.0550.0650.6170.264
150.0450.3880.3960.172
PWM
ACGT
010.071-1.8220.771-0.506
02-2.099-2.0221.208-0.924
030.52-0.5220.175-0.627
04-0.369-1.7071.104-2.183
05-1.4260.362-0.6640.593
06-2.4851.033-1.144-0.237
07-0.949-3.3721.263-3.121
08-3.121-1.3110.7890.396
09-0.5060.453-1.6050.484
10-0.852-2.7531.223-2.183
11-2.022-1.557-1.2071.211
12-2.7531.317-2.485-2.099
13-1.468-0.153-1.3480.975
14-1.468-1.3110.8940.053
15-1.6550.4340.453-0.369
Standard thresholds
P-value Threshold
0.001 4.33121
0.0005 5.23316
0.0001 7.11246