MotifZN75D.H12INVITRO.1.P.D
Gene (human)ZNF75D
(GeneCards)
Gene synonyms (human)ZNF75, ZNF82
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length25
ConsensusTGYRRdSARTGTGGGAAAKCCTTCM
GC content45.02%
Information content (bits; total / per base)33.705 / 1.348
Data sourcesChIP-Seq
Aligned words592

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (8) 0.768 0.81 0.565 0.604 0.938 0.951 10.562 12.746 132.848 147.032
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF75-like {2.3.3.6} (TFClass)
TFClass IDTFClass: 2.3.3.6.3
HGNCHGNC:13145
MGI
EntrezGene (human)GeneID:7626
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN75D_HUMAN
UniProt ID (mouse)
UniProt AC (human)P51815
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0113.011.07.0561.0
0215.010.0556.011.0
038.0177.016.0391.0
04428.056.089.019.0
05347.043.0173.029.0
0681.066.0188.0257.0
0747.0109.0412.024.0
08510.014.016.052.0
09370.048.0149.025.0
103.01.09.0579.0
110.00.0592.00.0
121.07.00.0584.0
132.00.0590.00.0
147.00.0579.06.0
1548.00.0540.04.0
16592.00.00.00.0
17576.00.016.00.0
18554.00.037.01.0
1932.016.0450.094.0
205.0531.035.021.0
2121.0551.03.017.0
221.04.00.0587.0
2316.018.04.0554.0
242.0430.02.0158.0
25411.074.034.073.0
PFM
ACGT
010.0220.0190.0120.948
020.0250.0170.9390.019
030.0140.2990.0270.66
040.7230.0950.150.032
050.5860.0730.2920.049
060.1370.1110.3180.434
070.0790.1840.6960.041
080.8610.0240.0270.088
090.6250.0810.2520.042
100.0050.0020.0150.978
110.00.01.00.0
120.0020.0120.00.986
130.0030.00.9970.0
140.0120.00.9780.01
150.0810.00.9120.007
161.00.00.00.0
170.9730.00.0270.0
180.9360.00.0630.002
190.0540.0270.760.159
200.0080.8970.0590.035
210.0350.9310.0050.029
220.0020.0070.00.992
230.0270.030.0070.936
240.0030.7260.0030.267
250.6940.1250.0570.123
PWM
ACGT
01-2.327-2.475-2.8571.325
02-2.199-2.5571.316-2.475
03-2.7470.177-2.140.965
041.055-0.954-0.502-1.983
050.846-1.210.155-1.587
06-0.594-0.7940.2370.547
07-1.124-0.3021.017-1.766
081.23-2.261-2.14-1.026
090.91-1.1040.007-1.727
10-3.483-4.054-2.6471.356
11-4.541-4.5411.378-4.541
12-4.054-2.857-4.5411.365
13-3.728-4.5411.375-4.541
14-2.857-4.5411.356-2.98
15-1.104-4.5411.287-3.286
161.378-4.541-4.541-4.541
171.351-4.541-2.14-4.541
181.312-4.541-1.355-4.054
19-1.494-2.141.105-0.448
20-3.1211.27-1.408-1.89
21-1.891.307-3.483-2.085
22-4.054-3.286-4.5411.37
23-2.14-2.033-3.2861.312
24-3.7281.06-3.7280.065
251.015-0.683-1.436-0.696
Standard thresholds
P-value Threshold
0.001 -9.27939
0.0005 -7.29674
0.0001 -3.04189