| Motif | ZN749.H12INVITRO.1.P.D |
| Gene (human) | ZNF749 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | ZN749.H12INVITRO.1.P.D |
| Gene (human) | ZNF749 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 9 |
| Consensus | RCCCCARCY |
| GC content | 67.66% |
| Information content (bits; total / per base) | 11.346 / 1.261 |
| Data sources | ChIP-Seq |
| Aligned words | 67 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (4) | 0.822 | 0.859 | 0.669 | 0.678 | 0.784 | 0.853 | 2.608 | 2.919 | 32.926 | 35.174 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.217 |
| HGNC | HGNC:32783 |
| MGI | |
| EntrezGene (human) | GeneID:388567 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | ZN749_HUMAN |
| UniProt ID (mouse) | |
| UniProt AC (human) | O43361 (TFClass) |
| UniProt AC (mouse) | |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN749.H12INVITRO.1.P.D.pcm |
| PWM | ZN749.H12INVITRO.1.P.D.pwm |
| PFM | ZN749.H12INVITRO.1.P.D.pfm |
| Alignment | ZN749.H12INVITRO.1.P.D.words.tsv |
| Threshold to P-value map | ZN749.H12INVITRO.1.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN749.H12INVITRO.1.P.D_jaspar_format.txt |
| MEME format | ZN749.H12INVITRO.1.P.D_meme_format.meme |
| Transfac format | ZN749.H12INVITRO.1.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 38.0 | 5.0 | 16.0 | 8.0 |
| 02 | 0.0 | 66.0 | 0.0 | 1.0 |
| 03 | 5.0 | 56.0 | 1.0 | 5.0 |
| 04 | 1.0 | 66.0 | 0.0 | 0.0 |
| 05 | 1.0 | 63.0 | 1.0 | 2.0 |
| 06 | 66.0 | 1.0 | 0.0 | 0.0 |
| 07 | 49.0 | 5.0 | 9.0 | 4.0 |
| 08 | 0.0 | 40.0 | 27.0 | 0.0 |
| 09 | 5.0 | 49.0 | 3.0 | 10.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.567 | 0.075 | 0.239 | 0.119 |
| 02 | 0.0 | 0.985 | 0.0 | 0.015 |
| 03 | 0.075 | 0.836 | 0.015 | 0.075 |
| 04 | 0.015 | 0.985 | 0.0 | 0.0 |
| 05 | 0.015 | 0.94 | 0.015 | 0.03 |
| 06 | 0.985 | 0.015 | 0.0 | 0.0 |
| 07 | 0.731 | 0.075 | 0.134 | 0.06 |
| 08 | 0.0 | 0.597 | 0.403 | 0.0 |
| 09 | 0.075 | 0.731 | 0.045 | 0.149 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.786 | -1.079 | -0.043 | -0.676 |
| 02 | -2.829 | 1.326 | -2.829 | -2.161 |
| 03 | -1.079 | 1.165 | -2.161 | -1.079 |
| 04 | -2.161 | 1.326 | -2.829 | -2.829 |
| 05 | -2.161 | 1.28 | -2.161 | -1.764 |
| 06 | 1.326 | -2.161 | -2.829 | -2.829 |
| 07 | 1.034 | -1.079 | -0.572 | -1.26 |
| 08 | -2.829 | 0.836 | 0.455 | -2.829 |
| 09 | -1.079 | 1.034 | -1.48 | -0.477 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.73273 |
| 0.0005 | 5.576105 |
| 0.0001 | 7.26664 |