| Motif | ZN740.H12INVIVO.0.P.C |
| Gene (human) | ZNF740 (GeneCards) |
| Gene synonyms (human) | TB7 |
| Gene (mouse) | Znf740 |
| Gene synonyms (mouse) | Zfp740 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | ZN740.H12INVIVO.0.P.C |
| Gene (human) | ZNF740 (GeneCards) |
| Gene synonyms (human) | TB7 |
| Gene (mouse) | Znf740 |
| Gene synonyms (mouse) | Zfp740 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 11 |
| Consensus | KYGGGGGGGSv |
| GC content | 85.08% |
| Information content (bits; total / per base) | 14.846 / 1.35 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (7) | 0.934 | 0.957 | 0.85 | 0.906 | 0.873 | 0.896 | 2.926 | 3.112 | 365.481 | 383.602 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 1 experiments | median | 0.799 | 0.705 | 0.785 | 0.702 | 0.705 | 0.66 |
| best | 0.799 | 0.705 | 0.785 | 0.702 | 0.705 | 0.66 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Other with up to three adjacent zinc fingers {2.3.2} (TFClass) |
| TF subfamily | Other {2.3.2.4} (TFClass) |
| TFClass ID | TFClass: 2.3.2.4.5 |
| HGNC | HGNC:27465 |
| MGI | MGI:1915994 |
| EntrezGene (human) | GeneID:283337 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:68744 (SSTAR profile) |
| UniProt ID (human) | ZN740_HUMAN |
| UniProt ID (mouse) | ZN740_MOUSE |
| UniProt AC (human) | Q8NDX6 (TFClass) |
| UniProt AC (mouse) | Q6NZQ6 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN740.H12INVIVO.0.P.C.pcm |
| PWM | ZN740.H12INVIVO.0.P.C.pwm |
| PFM | ZN740.H12INVIVO.0.P.C.pfm |
| Alignment | ZN740.H12INVIVO.0.P.C.words.tsv |
| Threshold to P-value map | ZN740.H12INVIVO.0.P.C.thr |
| Motif in other formats | |
| JASPAR format | ZN740.H12INVIVO.0.P.C_jaspar_format.txt |
| MEME format | ZN740.H12INVIVO.0.P.C_meme_format.meme |
| Transfac format | ZN740.H12INVIVO.0.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 94.0 | 68.0 | 723.0 | 115.0 |
| 02 | 130.0 | 184.0 | 17.0 | 669.0 |
| 03 | 4.0 | 0.0 | 996.0 | 0.0 |
| 04 | 0.0 | 0.0 | 1000.0 | 0.0 |
| 05 | 9.0 | 0.0 | 988.0 | 3.0 |
| 06 | 2.0 | 0.0 | 996.0 | 2.0 |
| 07 | 3.0 | 0.0 | 997.0 | 0.0 |
| 08 | 24.0 | 0.0 | 890.0 | 86.0 |
| 09 | 47.0 | 5.0 | 899.0 | 49.0 |
| 10 | 73.0 | 219.0 | 616.0 | 92.0 |
| 11 | 141.0 | 199.0 | 562.0 | 98.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.094 | 0.068 | 0.723 | 0.115 |
| 02 | 0.13 | 0.184 | 0.017 | 0.669 |
| 03 | 0.004 | 0.0 | 0.996 | 0.0 |
| 04 | 0.0 | 0.0 | 1.0 | 0.0 |
| 05 | 0.009 | 0.0 | 0.988 | 0.003 |
| 06 | 0.002 | 0.0 | 0.996 | 0.002 |
| 07 | 0.003 | 0.0 | 0.997 | 0.0 |
| 08 | 0.024 | 0.0 | 0.89 | 0.086 |
| 09 | 0.047 | 0.005 | 0.899 | 0.049 |
| 10 | 0.073 | 0.219 | 0.616 | 0.092 |
| 11 | 0.141 | 0.199 | 0.562 | 0.098 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.967 | -1.284 | 1.057 | -0.769 |
| 02 | -0.648 | -0.304 | -2.598 | 0.98 |
| 03 | -3.783 | -4.982 | 1.377 | -4.982 |
| 04 | -4.982 | -4.982 | 1.381 | -4.982 |
| 05 | -3.156 | -4.982 | 1.369 | -3.975 |
| 06 | -4.213 | -4.982 | 1.377 | -4.213 |
| 07 | -3.975 | -4.982 | 1.378 | -4.982 |
| 08 | -2.281 | -4.982 | 1.265 | -1.054 |
| 09 | -1.642 | -3.622 | 1.275 | -1.602 |
| 10 | -1.215 | -0.131 | 0.898 | -0.988 |
| 11 | -0.567 | -0.226 | 0.806 | -0.926 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.305435 |
| 0.0005 | 3.66402 |
| 0.0001 | 6.58408 |