| Motif | ZN740.H12INVITRO.0.P.C |
| Gene (human) | ZNF740 (GeneCards) |
| Gene synonyms (human) | TB7 |
| Gene (mouse) | Znf740 |
| Gene synonyms (mouse) | Zfp740 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | C |
| Motif | ZN740.H12INVITRO.0.P.C |
| Gene (human) | ZNF740 (GeneCards) |
| Gene synonyms (human) | TB7 |
| Gene (mouse) | Znf740 |
| Gene synonyms (mouse) | Zfp740 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | C |
| Motif length | 11 |
| Consensus | KYGGGGGGGSv |
| GC content | 84.39% |
| Information content (bits; total / per base) | 14.622 / 1.329 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (7) | 0.931 | 0.955 | 0.839 | 0.899 | 0.883 | 0.903 | 2.965 | 3.148 | 361.959 | 381.77 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 1 experiments | median | 0.804 | 0.713 | 0.785 | 0.705 | 0.698 | 0.659 |
| best | 0.804 | 0.713 | 0.785 | 0.705 | 0.698 | 0.659 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Other with up to three adjacent zinc fingers {2.3.2} (TFClass) |
| TF subfamily | Other {2.3.2.4} (TFClass) |
| TFClass ID | TFClass: 2.3.2.4.5 |
| HGNC | HGNC:27465 |
| MGI | MGI:1915994 |
| EntrezGene (human) | GeneID:283337 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:68744 (SSTAR profile) |
| UniProt ID (human) | ZN740_HUMAN |
| UniProt ID (mouse) | ZN740_MOUSE |
| UniProt AC (human) | Q8NDX6 (TFClass) |
| UniProt AC (mouse) | Q6NZQ6 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN740.H12INVITRO.0.P.C.pcm |
| PWM | ZN740.H12INVITRO.0.P.C.pwm |
| PFM | ZN740.H12INVITRO.0.P.C.pfm |
| Alignment | ZN740.H12INVITRO.0.P.C.words.tsv |
| Threshold to P-value map | ZN740.H12INVITRO.0.P.C.thr |
| Motif in other formats | |
| JASPAR format | ZN740.H12INVITRO.0.P.C_jaspar_format.txt |
| MEME format | ZN740.H12INVITRO.0.P.C_meme_format.meme |
| Transfac format | ZN740.H12INVITRO.0.P.C_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 94.0 | 89.0 | 709.0 | 108.0 |
| 02 | 146.0 | 193.0 | 0.0 | 661.0 |
| 03 | 0.0 | 0.0 | 1000.0 | 0.0 |
| 04 | 0.0 | 0.0 | 1000.0 | 0.0 |
| 05 | 10.0 | 0.0 | 986.0 | 4.0 |
| 06 | 3.0 | 0.0 | 996.0 | 1.0 |
| 07 | 2.0 | 0.0 | 998.0 | 0.0 |
| 08 | 38.0 | 0.0 | 863.0 | 99.0 |
| 09 | 52.0 | 8.0 | 893.0 | 47.0 |
| 10 | 89.0 | 229.0 | 588.0 | 94.0 |
| 11 | 163.0 | 199.0 | 532.0 | 106.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.094 | 0.089 | 0.709 | 0.108 |
| 02 | 0.146 | 0.193 | 0.0 | 0.661 |
| 03 | 0.0 | 0.0 | 1.0 | 0.0 |
| 04 | 0.0 | 0.0 | 1.0 | 0.0 |
| 05 | 0.01 | 0.0 | 0.986 | 0.004 |
| 06 | 0.003 | 0.0 | 0.996 | 0.001 |
| 07 | 0.002 | 0.0 | 0.998 | 0.0 |
| 08 | 0.038 | 0.0 | 0.863 | 0.099 |
| 09 | 0.052 | 0.008 | 0.893 | 0.047 |
| 10 | 0.089 | 0.229 | 0.588 | 0.094 |
| 11 | 0.163 | 0.199 | 0.532 | 0.106 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.967 | -1.02 | 1.038 | -0.83 |
| 02 | -0.533 | -0.257 | -4.982 | 0.968 |
| 03 | -4.982 | -4.982 | 1.381 | -4.982 |
| 04 | -4.982 | -4.982 | 1.381 | -4.982 |
| 05 | -3.066 | -4.982 | 1.367 | -3.783 |
| 06 | -3.975 | -4.982 | 1.377 | -4.525 |
| 07 | -4.213 | -4.982 | 1.379 | -4.982 |
| 08 | -1.846 | -4.982 | 1.234 | -0.916 |
| 09 | -1.544 | -3.253 | 1.268 | -1.642 |
| 10 | -1.02 | -0.087 | 0.851 | -0.967 |
| 11 | -0.424 | -0.226 | 0.752 | -0.849 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.349695 |
| 0.0005 | 3.685485 |
| 0.0001 | 6.67468 |