MotifZN740.H12CORE.0.P.C
Gene (human)ZNF740
(GeneCards)
Gene synonyms (human)TB7
Gene (mouse)Znf740
Gene synonyms (mouse)Zfp740
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length11
ConsensusKYGGGGGGGSv
GC content85.08%
Information content (bits; total / per base)14.846 / 1.35
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.934 0.957 0.85 0.906 0.873 0.896 2.926 3.112 365.481 383.602

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 0.799 0.705 0.785 0.702 0.705 0.66
best 0.799 0.705 0.785 0.702 0.705 0.66
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyOther with up to three adjacent zinc fingers {2.3.2} (TFClass)
TF subfamilyOther {2.3.2.4} (TFClass)
TFClass IDTFClass: 2.3.2.4.5
HGNCHGNC:27465
MGIMGI:1915994
EntrezGene (human)GeneID:283337
(SSTAR profile)
EntrezGene (mouse)GeneID:68744
(SSTAR profile)
UniProt ID (human)ZN740_HUMAN
UniProt ID (mouse)ZN740_MOUSE
UniProt AC (human)Q8NDX6
(TFClass)
UniProt AC (mouse)Q6NZQ6
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
0194.068.0723.0115.0
02130.0184.017.0669.0
034.00.0996.00.0
040.00.01000.00.0
059.00.0988.03.0
062.00.0996.02.0
073.00.0997.00.0
0824.00.0890.086.0
0947.05.0899.049.0
1073.0219.0616.092.0
11141.0199.0562.098.0
PFM
ACGT
010.0940.0680.7230.115
020.130.1840.0170.669
030.0040.00.9960.0
040.00.01.00.0
050.0090.00.9880.003
060.0020.00.9960.002
070.0030.00.9970.0
080.0240.00.890.086
090.0470.0050.8990.049
100.0730.2190.6160.092
110.1410.1990.5620.098
PWM
ACGT
01-0.967-1.2841.057-0.769
02-0.648-0.304-2.5980.98
03-3.783-4.9821.377-4.982
04-4.982-4.9821.381-4.982
05-3.156-4.9821.369-3.975
06-4.213-4.9821.377-4.213
07-3.975-4.9821.378-4.982
08-2.281-4.9821.265-1.054
09-1.642-3.6221.275-1.602
10-1.215-0.1310.898-0.988
11-0.567-0.2260.806-0.926
Standard thresholds
P-value Threshold
0.001 2.305435
0.0005 3.66402
0.0001 6.58408