MotifZN730.H12CORE.0.P.C
Gene (human)ZNF730
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length15
ConsensusRhMdYRGChKCCYvh
GC content57.62%
Information content (bits; total / per base)10.939 / 0.729
Data sourcesChIP-Seq
Aligned words976

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.758 0.758 0.631 0.633 0.771 0.776 3.679 3.711 150.534 171.041
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF100-like {2.3.3.59} (TFClass)
TFClass IDTFClass: 2.3.3.59.4
HGNCHGNC:32470
MGI
EntrezGene (human)GeneID:100129543
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN730_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q6ZMV8
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01131.031.0763.051.0
02200.0450.0153.0173.0
03314.0537.021.0104.0
04428.053.0232.0263.0
0539.0170.054.0713.0
06700.016.0217.043.0
0717.033.0884.042.0
0827.0899.024.026.0
09423.0212.0111.0230.0
1027.056.0436.0457.0
1169.0849.024.034.0
1239.0786.017.0134.0
1375.0744.028.0129.0
14507.0176.0154.0139.0
15528.0175.0131.0142.0
PFM
ACGT
010.1340.0320.7820.052
020.2050.4610.1570.177
030.3220.550.0220.107
040.4390.0540.2380.269
050.040.1740.0550.731
060.7170.0160.2220.044
070.0170.0340.9060.043
080.0280.9210.0250.027
090.4330.2170.1140.236
100.0280.0570.4470.468
110.0710.870.0250.035
120.040.8050.0170.137
130.0770.7620.0290.132
140.5190.180.1580.142
150.5410.1790.1340.145
PWM
ACGT
01-0.616-2.0161.135-1.539
02-0.1970.609-0.463-0.341
030.2510.785-2.381-0.843
040.559-1.502-0.050.074
05-1.797-0.358-1.4841.068
061.049-2.629-0.116-1.704
07-2.575-1.9571.282-1.726
08-2.1471.299-2.257-2.182
090.547-0.14-0.779-0.059
10-2.147-1.4490.5770.624
11-1.2451.242-2.257-1.928
12-1.7971.165-2.575-0.594
13-1.1641.11-2.112-0.631
140.728-0.324-0.456-0.557
150.768-0.33-0.616-0.536
Standard thresholds
P-value Threshold
0.001 4.49246
0.0005 5.34671
0.0001 7.13721