MotifZN716.H12INVIVO.1.P.C
Gene (human)ZNF716
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length11
ConsensusdSWRGAAAKWb
GC content40.97%
Information content (bits; total / per base)10.108 / 0.919
Data sourcesChIP-Seq
Aligned words1013

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.71 0.717 0.642 0.644 0.737 0.742 2.645 2.667 82.527 94.921
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF479-like {2.3.3.57} (TFClass)
TFClass IDTFClass: 2.3.3.57.2
HGNCHGNC:32458
MGI
EntrezGene (human)GeneID:441234
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN716_HUMAN
UniProt ID (mouse)
UniProt AC (human)A6NP11
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01282.069.0502.0160.0
0275.0750.0124.064.0
03776.018.061.0158.0
04280.01.0692.040.0
0519.08.0968.018.0
06880.051.080.02.0
07899.061.041.012.0
08909.017.030.057.0
0980.048.0319.0566.0
10754.035.094.0130.0
1199.0196.0400.0318.0
PFM
ACGT
010.2780.0680.4960.158
020.0740.740.1220.063
030.7660.0180.060.156
040.2760.0010.6830.039
050.0190.0080.9560.018
060.8690.050.0790.002
070.8870.060.040.012
080.8970.0170.030.056
090.0790.0470.3150.559
100.7440.0350.0930.128
110.0980.1930.3950.314
PWM
ACGT
010.107-1.2820.681-0.455
02-1.2011.081-0.707-1.356
031.115-2.559-1.402-0.468
040.1-4.5371.001-1.81
05-2.51-3.2661.336-2.559
061.241-1.576-1.138-4.225
071.262-1.402-1.786-2.922
081.273-2.611-2.084-1.468
09-1.138-1.6350.2290.8
101.086-1.938-0.98-0.66
11-0.929-0.2540.4550.226
Standard thresholds
P-value Threshold
0.001 4.695165
0.0005 5.52132
0.0001 7.232675