MotifZN716.H12INVIVO.0.P.C
Gene (human)ZNF716
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length25
ConsensusddShdRvMWdWdnRRnMWKASdvdd
GC content39.51%
Information content (bits; total / per base)12.295 / 0.492
Data sourcesChIP-Seq
Aligned words1012

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.788 0.798 0.72 0.733 0.836 0.852 3.738 3.89 200.96 236.658
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF479-like {2.3.3.57} (TFClass)
TFClass IDTFClass: 2.3.3.57.2
HGNCHGNC:32458
MGI
EntrezGene (human)GeneID:441234
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN716_HUMAN
UniProt ID (mouse)
UniProt AC (human)A6NP11
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01316.090.0336.0270.0
02246.090.0521.0155.0
03145.0616.0151.0100.0
04592.0160.0123.0137.0
05357.042.0473.0140.0
06155.037.0756.064.0
07529.0160.0275.048.0
08763.0194.013.042.0
09751.083.070.0108.0
10187.051.0204.0570.0
11583.035.0119.0275.0
12152.0139.0363.0358.0
13242.0253.0310.0207.0
14695.054.0197.066.0
15606.012.0362.032.0
16262.0257.0219.0274.0
17351.0567.037.057.0
18168.077.069.0698.0
1953.023.0171.0765.0
20930.027.019.036.0
2159.0532.0371.050.0
22389.073.094.0456.0
23557.0120.0246.089.0
24482.0109.0168.0253.0
25257.0109.0420.0226.0
PFM
ACGT
010.3120.0890.3320.267
020.2430.0890.5150.153
030.1430.6090.1490.099
040.5850.1580.1220.135
050.3530.0420.4670.138
060.1530.0370.7470.063
070.5230.1580.2720.047
080.7540.1920.0130.042
090.7420.0820.0690.107
100.1850.050.2020.563
110.5760.0350.1180.272
120.150.1370.3590.354
130.2390.250.3060.205
140.6870.0530.1950.065
150.5990.0120.3580.032
160.2590.2540.2160.271
170.3470.560.0370.056
180.1660.0760.0680.69
190.0520.0230.1690.756
200.9190.0270.0190.036
210.0580.5260.3670.049
220.3840.0720.0930.451
230.550.1190.2430.088
240.4760.1080.1660.25
250.2540.1080.4150.223
PWM
ACGT
010.221-1.0210.2820.065
02-0.028-1.0210.719-0.486
03-0.5520.886-0.512-0.918
040.846-0.454-0.714-0.608
050.342-1.7620.623-0.586
06-0.486-1.8841.09-1.355
070.734-0.4540.083-1.634
081.099-0.263-2.85-1.762
091.084-1.101-1.267-0.842
10-0.3-1.575-0.2140.808
110.831-1.937-0.7470.083
12-0.505-0.5930.3590.345
13-0.0440.00.202-0.199
141.006-1.52-0.248-1.325
150.87-2.9210.356-2.022
160.0350.016-0.1430.079
170.3250.803-1.884-1.467
18-0.406-1.174-1.2811.01
19-1.538-2.332-0.3881.102
201.297-2.182-2.509-1.91
21-1.4340.740.381-1.594
220.428-1.226-0.9790.586
230.785-0.738-0.028-1.032
240.641-0.833-0.4060.0
250.016-0.8330.504-0.112
Standard thresholds
P-value Threshold
0.001 4.21436
0.0005 5.10366
0.0001 6.98261