MotifZN713.H12INVIVO.0.SM.D
Gene (human)ZNF713
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length20
ConsensusnnMSACSACTGCCASSAMMn
GC content55.09%
Information content (bits; total / per base)17.757 / 0.888
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words8013

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.71 0.722 0.608 0.62 0.557 0.571
best 0.737 0.75 0.621 0.635 0.565 0.58
Methyl HT-SELEX, 1 experiments median 0.737 0.75 0.621 0.635 0.565 0.58
best 0.737 0.75 0.621 0.635 0.565 0.58
Non-Methyl HT-SELEX, 1 experiments median 0.682 0.694 0.595 0.605 0.549 0.562
best 0.682 0.694 0.595 0.605 0.549 0.562
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.14
HGNCHGNC:22043
MGI
EntrezGene (human)
EntrezGene (mouse)
UniProt ID (human)ZN713_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q8N859
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
012203.252591.251211.252007.25
022062.01955.01198.02798.0
034585.02189.0383.0856.0
04482.01161.06091.0279.0
056640.0976.0129.0268.0
06722.06782.0108.0401.0
07728.01080.05946.0259.0
086577.01238.074.0124.0
09726.06738.0430.0119.0
10484.0989.093.06447.0
11151.0706.06815.0341.0
12585.07339.050.039.0
13110.07804.035.064.0
146690.0230.063.01030.0
15368.06264.0997.0384.0
161091.01330.05464.0128.0
176469.01034.0103.0407.0
185903.01162.0393.0555.0
195023.251349.25856.25784.25
201868.02793.02142.01210.0
PFM
ACGT
010.2750.3230.1510.25
020.2570.2440.150.349
030.5720.2730.0480.107
040.060.1450.760.035
050.8290.1220.0160.033
060.090.8460.0130.05
070.0910.1350.7420.032
080.8210.1540.0090.015
090.0910.8410.0540.015
100.060.1230.0120.805
110.0190.0880.850.043
120.0730.9160.0060.005
130.0140.9740.0040.008
140.8350.0290.0080.129
150.0460.7820.1240.048
160.1360.1660.6820.016
170.8070.1290.0130.051
180.7370.1450.0490.069
190.6270.1680.1070.098
200.2330.3490.2670.151
PWM
ACGT
010.0950.257-0.5020.002
020.029-0.024-0.5130.334
030.8270.089-1.65-0.849
04-1.421-0.5451.111-1.964
051.198-0.718-2.727-2.004
06-1.0191.219-2.901-1.604
07-1.01-0.6171.087-2.038
081.188-0.481-3.27-2.765
09-1.0131.212-1.535-2.806
10-1.417-0.705-3.0471.168
11-2.572-1.0411.224-1.765
12-1.2281.298-3.648-3.884
13-2.8831.359-3.986-3.41
141.205-2.156-3.425-0.664
15-1.6891.139-0.697-1.647
16-0.607-0.4091.003-2.734
171.171-0.66-2.947-1.589
181.08-0.544-1.624-1.281
190.919-0.395-0.848-0.936
20-0.070.3320.067-0.503
Standard thresholds
P-value Threshold
0.001 2.11566
0.0005 3.31181
0.0001 5.84541