MotifZN711.H12INVIVO.0.P.C
Gene (human)ZNF711
(GeneCards)
Gene synonyms (human)CMPX1, ZNF6
Gene (mouse)Znf711
Gene synonyms (mouse)Zfp711
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length13
ConsensusbhSvAGGCCnnKS
GC content67.75%
Information content (bits; total / per base)9.925 / 0.763
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (6) 0.709 0.745 0.534 0.582 0.661 0.75 1.851 2.123 16.772 19.076
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyZNF639-like {2.3.4.13} (TFClass)
TFClass IDTFClass: 2.3.4.13.2
HGNCHGNC:13128
MGIMGI:3045342
EntrezGene (human)GeneID:7552
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN711_HUMAN
UniProt ID (mouse)ZN711_MOUSE
UniProt AC (human)Q9Y462
(TFClass)
UniProt AC (mouse)A2ANX9
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0168.0264.0321.0347.0
02134.0328.0133.0405.0
0361.0580.0308.051.0
04104.0564.0235.097.0
05973.012.012.03.0
0611.02.0856.0131.0
0713.05.0756.0226.0
084.0970.00.026.0
0911.0911.02.076.0
10200.0350.0162.0288.0
11122.0302.0259.0317.0
12112.045.0546.0297.0
1357.0594.0290.059.0
PFM
ACGT
010.0680.2640.3210.347
020.1340.3280.1330.405
030.0610.580.3080.051
040.1040.5640.2350.097
050.9730.0120.0120.003
060.0110.0020.8560.131
070.0130.0050.7560.226
080.0040.970.00.026
090.0110.9110.0020.076
100.20.350.1620.288
110.1220.3020.2590.317
120.1120.0450.5460.297
130.0570.5940.290.059
PWM
ACGT
01-1.2840.0540.2480.326
02-0.6180.27-0.6250.48
03-1.390.8380.207-1.563
04-0.8670.81-0.061-0.936
051.354-2.909-2.909-3.975
06-2.985-4.2131.226-0.64
07-2.839-3.6221.102-0.1
08-3.7831.351-4.982-2.206
09-2.9851.288-4.213-1.175
10-0.2210.335-0.430.141
11-0.710.1880.0350.236
12-0.795-1.6840.7770.171
13-1.4550.8610.147-1.422
Standard thresholds
P-value Threshold
0.001 4.81901
0.0005 5.70611
0.0001 7.40293