MotifZN708.H12INVIVO.1.P.B
Gene (human)ZNF708
(GeneCards)
Gene synonyms (human)KOX8, ZNF15, ZNF15L1
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length10
ConsensusAGGYACAGCh
GC content59.26%
Information content (bits; total / per base)12.733 / 1.273
Data sourcesChIP-Seq
Aligned words1002

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.814 0.917 0.813 0.897 0.795 0.922 4.155 4.928 343.319 360.201
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.181
HGNCHGNC:12945
MGI
EntrezGene (human)GeneID:7562
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN708_HUMAN
UniProt ID (mouse)
UniProt AC (human)P17019
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01890.01.0104.07.0
0211.07.0956.028.0
0343.042.0900.017.0
0413.0437.015.0537.0
05909.038.041.014.0
0623.0902.016.061.0
07847.05.0129.021.0
0816.05.0971.010.0
0947.0891.027.037.0
10162.0386.065.0389.0
PFM
ACGT
010.8880.0010.1040.007
020.0110.0070.9540.028
030.0430.0420.8980.017
040.0130.4360.0150.536
050.9070.0380.0410.014
060.0230.90.0160.061
070.8450.0050.1290.021
080.0160.0050.9690.01
090.0470.8890.0270.037
100.1620.3850.0650.388
PWM
ACGT
011.263-4.527-0.869-3.364
02-2.987-3.3641.334-2.138
03-1.73-1.7521.274-2.6
04-2.8410.554-2.7130.759
051.284-1.848-1.775-2.775
06-2.3221.276-2.655-1.392
071.213-3.624-0.657-2.407
08-2.655-3.6241.35-3.068
09-1.6441.264-2.172-1.874
10-0.4320.43-1.330.438
Standard thresholds
P-value Threshold
0.001 3.879115
0.0005 4.84446
0.0001 7.189945