MotifZN708.H12INVIVO.0.P.B
Gene (human)ZNF708
(GeneCards)
Gene synonyms (human)KOX8, ZNF15, ZNF15L1
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length24
ConsensusvvnvhvddvRRnAGGYACAGChnn
GC content51.77%
Information content (bits; total / per base)16.921 / 0.705
Data sourcesChIP-Seq
Aligned words780

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (9) 0.831 0.913 0.839 0.902 0.822 0.92 6.557 7.35 363.77 396.125
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.181
HGNCHGNC:12945
MGI
EntrezGene (human)GeneID:7562
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN708_HUMAN
UniProt ID (mouse)
UniProt AC (human)P17019
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01210.0117.0341.0112.0
02146.0101.0434.099.0
03178.0298.0180.0124.0
04183.0355.0124.0118.0
05146.0149.0119.0366.0
06442.0121.0109.0108.0
07396.069.0212.0103.0
08145.0125.0180.0330.0
09469.0120.0102.089.0
10467.060.0216.037.0
11198.035.0437.0110.0
12117.0219.0216.0228.0
13733.02.040.05.0
148.01.0764.07.0
1514.028.0732.06.0
1610.0323.05.0442.0
17742.011.013.014.0
184.0682.013.081.0
19721.02.050.07.0
2026.04.0742.08.0
2144.0675.021.040.0
22156.0230.020.0374.0
23191.0154.0305.0130.0
24193.0136.0300.0151.0
PFM
ACGT
010.2690.150.4370.144
020.1870.1290.5560.127
030.2280.3820.2310.159
040.2350.4550.1590.151
050.1870.1910.1530.469
060.5670.1550.140.138
070.5080.0880.2720.132
080.1860.160.2310.423
090.6010.1540.1310.114
100.5990.0770.2770.047
110.2540.0450.560.141
120.150.2810.2770.292
130.940.0030.0510.006
140.010.0010.9790.009
150.0180.0360.9380.008
160.0130.4140.0060.567
170.9510.0140.0170.018
180.0050.8740.0170.104
190.9240.0030.0640.009
200.0330.0050.9510.01
210.0560.8650.0270.051
220.20.2950.0260.479
230.2450.1970.3910.167
240.2470.1740.3850.194
PWM
ACGT
010.074-0.5050.555-0.548
02-0.287-0.650.795-0.67
03-0.090.421-0.079-0.448
04-0.0630.595-0.448-0.497
05-0.287-0.266-0.4880.626
060.814-0.472-0.575-0.584
070.704-1.0240.083-0.631
08-0.293-0.44-0.0790.523
090.873-0.48-0.64-0.774
100.868-1.160.101-1.627
110.015-1.680.802-0.566
12-0.5050.1150.1010.155
131.318-3.983-1.552-3.385
14-3.013-4.3011.359-3.122
15-2.53-1.8921.317-3.245
16-2.8250.501-3.3850.814
171.33-2.743-2.596-2.53
18-3.5471.246-2.596-0.867
191.301-3.983-1.337-3.122
20-1.961-3.5471.33-3.013
21-1.461.236-2.161-1.552
22-0.2210.164-2.2060.647
23-0.021-0.2340.444-0.401
24-0.01-0.3570.428-0.253
Standard thresholds
P-value Threshold
0.001 2.27306
0.0005 3.49506
0.0001 6.06941