MotifZN701.H12INVITRO.0.P.D
Gene (human)ZNF701
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length19
ConsensusddGAGMAbhhWRGGGGGRM
GC content59.5%
Information content (bits; total / per base)17.135 / 0.902
Data sourcesChIP-Seq
Aligned words220

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (10) 0.859 0.944 0.855 0.936 0.863 0.946 5.312 6.694 59.721 103.328
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF525-like {2.3.3.27} (TFClass)
TFClass IDTFClass: 2.3.3.27.2
HGNCHGNC:25597
MGI
EntrezGene (human)GeneID:55762
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN701_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q9NV72
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0174.023.095.028.0
0263.020.078.059.0
0315.02.0203.00.0
04202.00.014.04.0
057.05.0203.05.0
0665.0131.017.07.0
07203.02.014.01.0
089.0121.046.044.0
0932.0123.025.040.0
10105.039.022.054.0
11136.016.032.036.0
12122.018.065.015.0
1325.02.0188.05.0
142.02.0216.00.0
151.02.0213.04.0
1635.02.0174.09.0
1717.03.0187.013.0
1866.023.0118.013.0
19156.025.018.021.0
PFM
ACGT
010.3360.1050.4320.127
020.2860.0910.3550.268
030.0680.0090.9230.0
040.9180.00.0640.018
050.0320.0230.9230.023
060.2950.5950.0770.032
070.9230.0090.0640.005
080.0410.550.2090.2
090.1450.5590.1140.182
100.4770.1770.10.245
110.6180.0730.1450.164
120.5550.0820.2950.068
130.1140.0090.8550.023
140.0090.0090.9820.0
150.0050.0090.9680.018
160.1590.0090.7910.041
170.0770.0140.850.059
180.30.1050.5360.059
190.7090.1140.0820.095
PWM
ACGT
010.291-0.8390.536-0.652
020.133-0.9710.3420.069
03-1.237-2.8231.288-3.733
041.283-3.733-1.301-2.355
05-1.909-2.1831.288-2.183
060.1630.854-1.122-1.909
071.288-2.823-1.301-3.178
08-1.6950.775-0.174-0.217
09-0.5250.792-0.76-0.31
100.635-0.334-0.881-0.018
110.891-1.178-0.525-0.411
120.783-1.0690.163-1.237
13-0.76-2.8231.212-2.183
14-2.823-2.8231.35-3.733
15-3.178-2.8231.336-2.355
16-0.438-2.8231.135-1.695
17-1.122-2.5621.207-1.368
180.178-0.8390.75-1.368
191.027-0.76-1.069-0.925
Standard thresholds
P-value Threshold
0.001 2.66431
0.0005 3.81466
0.0001 6.24641