MotifZN684.H12INVIVO.0.P.C
Gene (human)ZNF684
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length16
ConsensusbRSWGTCCWCCCCWTb
GC content58.25%
Information content (bits; total / per base)18.56 / 1.16
Data sourcesChIP-Seq
Aligned words450

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.955 0.967 0.951 0.962 0.957 0.971 8.212 8.342 219.743 244.167

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Methyl HT-SELEX, 1 experiments median 0.62 0.645 0.544 0.568 0.514 0.535
best 0.62 0.645 0.544 0.568 0.514 0.535
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.68
HGNCHGNC:28418
MGI
EntrezGene (human)GeneID:127396
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN684_HUMAN
UniProt ID (mouse)
UniProt AC (human)Q5T5D7
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 1
PCM
ACGT
0152.0152.083.0163.0
02344.039.040.027.0
0316.0360.042.032.0
04318.034.035.063.0
058.034.0397.011.0
066.09.011.0424.0
076.0432.06.06.0
085.0428.02.015.0
09323.04.035.088.0
102.0411.028.09.0
1113.0421.04.012.0
120.0422.02.026.0
132.0439.01.08.0
1440.034.023.0353.0
1520.044.011.0375.0
1637.059.0152.0202.0
PFM
ACGT
010.1160.3380.1840.362
020.7640.0870.0890.06
030.0360.80.0930.071
040.7070.0760.0780.14
050.0180.0760.8820.024
060.0130.020.0240.942
070.0130.960.0130.013
080.0110.9510.0040.033
090.7180.0090.0780.196
100.0040.9130.0620.02
110.0290.9360.0090.027
120.00.9380.0040.058
130.0040.9760.0020.018
140.0890.0760.0510.784
150.0440.0980.0240.833
160.0820.1310.3380.449
PWM
ACGT
01-0.7560.297-0.2990.367
021.109-1.034-1.01-1.386
03-1.8731.154-0.963-1.224
041.03-1.166-1.138-0.569
05-2.482-1.1661.251-2.209
06-2.718-2.382-2.2091.317
07-2.7181.336-2.718-2.718
08-2.861.326-3.476-1.931
091.046-3.027-1.138-0.242
10-3.4761.286-1.351-2.382
11-2.061.31-3.027-2.132
12-4.3131.312-3.476-1.421
13-3.4761.352-3.809-2.482
14-1.01-1.166-1.5371.134
15-1.667-0.918-2.2091.195
16-1.085-0.6330.2970.579
Standard thresholds
P-value Threshold
0.001 1.77081
0.0005 3.01436
0.0001 5.65401