MotifZN682.H12INVIVO.1.P.B
Gene (human)ZNF682
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length11
ConsensusRRvbMAGCCCh
GC content70.53%
Information content (bits; total / per base)11.822 / 1.075
Data sourcesChIP-Seq
Aligned words401

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (6) 0.925 0.928 0.859 0.862 0.893 0.894 3.546 3.557 540.626 590.602
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.109
HGNCHGNC:28857
MGI
EntrezGene (human)GeneID:91120
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN682_HUMAN
UniProt ID (mouse)
UniProt AC (human)O95780
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0159.037.0271.034.0
0295.031.0246.029.0
0355.0238.056.052.0
0456.0162.074.0109.0
05226.0156.016.03.0
06395.03.01.02.0
073.06.0390.02.0
081.0390.04.06.0
091.0395.00.05.0
102.0397.00.02.0
1181.0199.039.082.0
PFM
ACGT
010.1470.0920.6760.085
020.2370.0770.6130.072
030.1370.5940.140.13
040.140.4040.1850.272
050.5640.3890.040.007
060.9850.0070.0020.005
070.0070.0150.9730.005
080.0020.9730.010.015
090.0020.9850.00.012
100.0050.990.00.005
110.2020.4960.0970.204
PWM
ACGT
01-0.52-0.9720.985-1.053
02-0.053-1.1410.889-1.205
03-0.5880.856-0.571-0.643
04-0.5710.474-0.2980.082
050.8050.437-1.76-3.119
061.36-3.119-3.707-3.37
07-3.119-2.6081.347-3.37
08-3.7071.347-2.918-2.608
09-3.7071.36-4.218-2.751
10-3.371.365-4.218-3.37
11-0.210.678-0.921-0.198
Standard thresholds
P-value Threshold
0.001 4.12038
0.0005 5.1816
0.0001 7.478395