MotifZN682.H12INVITRO.0.P.D
Gene (human)ZNF682
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length23
ConsensusRSMRSCYYYShvGRMYMAGCCCY
GC content65.05%
Information content (bits; total / per base)19.926 / 0.866
Data sourcesChIP-Seq
Aligned words967

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (6) 0.939 0.943 0.911 0.919 0.908 0.915 9.578 9.76 534.468 597.77
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.109
HGNCHGNC:28857
MGI
EntrezGene (human)GeneID:91120
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)ZN682_HUMAN
UniProt ID (mouse)
UniProt AC (human)O95780
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01578.0117.0204.068.0
02138.0158.0623.048.0
03587.0195.0118.067.0
04625.0109.0148.085.0
0570.0765.099.033.0
0656.0808.059.044.0
0755.0748.063.0101.0
0879.0204.070.0614.0
0968.0694.069.0136.0
10114.0600.0140.0113.0
11120.0484.081.0282.0
12369.0109.0399.090.0
1384.032.0803.048.0
14158.036.0742.031.0
15101.0729.051.086.0
1669.0203.086.0609.0
17700.0152.0107.08.0
18903.018.030.016.0
1917.026.0898.026.0
207.0875.030.055.0
2111.0919.07.030.0
2217.0925.06.019.0
23118.0687.042.0120.0
PFM
ACGT
010.5980.1210.2110.07
020.1430.1630.6440.05
030.6070.2020.1220.069
040.6460.1130.1530.088
050.0720.7910.1020.034
060.0580.8360.0610.046
070.0570.7740.0650.104
080.0820.2110.0720.635
090.070.7180.0710.141
100.1180.620.1450.117
110.1240.5010.0840.292
120.3820.1130.4130.093
130.0870.0330.830.05
140.1630.0370.7670.032
150.1040.7540.0530.089
160.0710.210.0890.63
170.7240.1570.1110.008
180.9340.0190.0310.017
190.0180.0270.9290.027
200.0070.9050.0310.057
210.0110.950.0070.031
220.0180.9570.0060.02
230.1220.710.0430.124
PWM
ACGT
010.868-0.718-0.168-1.251
02-0.555-0.4220.942-1.589
030.883-0.213-0.71-1.265
040.946-0.788-0.486-1.032
05-1.2221.147-0.883-1.948
06-1.4391.202-1.389-1.672
07-1.4571.125-1.325-0.863
08-1.104-0.168-1.2220.928
09-1.2511.05-1.236-0.57
10-0.7440.905-0.541-0.753
11-0.6930.691-1.080.153
120.42-0.7880.498-0.976
13-1.044-1.9771.196-1.589
14-0.422-1.8651.117-2.007
15-0.8631.099-1.53-1.021
16-1.236-0.173-1.0210.92
171.059-0.46-0.806-3.221
181.313-2.513-2.038-2.62
19-2.565-2.1731.307-2.173
20-3.331.281-2.038-1.457
21-2.9521.33-3.33-2.038
22-2.5651.337-3.451-2.464
23-0.711.04-1.717-0.693
Standard thresholds
P-value Threshold
0.001 1.59881
0.0005 2.80456
0.0001 5.38356