MotifZN667.H12INVIVO.0.P.C
Gene (human)ZNF667
(GeneCards)
Gene synonyms (human)
Gene (mouse)Znf667
Gene synonyms (mouse)Mip1, Zfp667
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length20
ConsensusdSdKbCYdYhvRAKYYCMnY
GC content52.4%
Information content (bits; total / per base)11.06 / 0.553
Data sourcesChIP-Seq
Aligned words929

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.83 0.833 0.798 0.809 0.831 0.832 5.681 5.785 69.886 88.319
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyUnclassified {2.3.3.0} (TFClass)
TFClass IDTFClass: 2.3.3.0.179
HGNCHGNC:28854
MGIMGI:2442757
EntrezGene (human)GeneID:63934
(SSTAR profile)
EntrezGene (mouse)GeneID:384763
(SSTAR profile)
UniProt ID (human)ZN667_HUMAN
UniProt ID (mouse)ZN667_MOUSE
UniProt AC (human)Q5HYK9
(TFClass)
UniProt AC (mouse)Q2TL60
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01188.0112.0206.0423.0
02102.0145.0590.092.0
03273.085.0154.0417.0
0460.044.0556.0269.0
0561.0169.0466.0233.0
0625.0802.058.044.0
0770.0568.017.0274.0
08202.086.0104.0537.0
0982.0192.080.0575.0
10461.0176.055.0237.0
11458.0228.0125.0118.0
12364.0143.0403.019.0
13752.054.079.044.0
1467.058.0688.0116.0
1520.0685.027.0197.0
1651.0292.09.0577.0
1720.0752.081.076.0
18500.0311.025.093.0
19125.0268.0235.0301.0
20103.0567.040.0219.0
PFM
ACGT
010.2020.1210.2220.455
020.110.1560.6350.099
030.2940.0910.1660.449
040.0650.0470.5980.29
050.0660.1820.5020.251
060.0270.8630.0620.047
070.0750.6110.0180.295
080.2170.0930.1120.578
090.0880.2070.0860.619
100.4960.1890.0590.255
110.4930.2450.1350.127
120.3920.1540.4340.02
130.8090.0580.0850.047
140.0720.0620.7410.125
150.0220.7370.0290.212
160.0550.3140.010.621
170.0220.8090.0870.082
180.5380.3350.0270.1
190.1350.2880.2530.324
200.1110.610.0430.236
PWM
ACGT
01-0.21-0.722-0.1190.596
02-0.814-0.4670.928-0.915
030.161-0.993-0.4070.582
04-1.333-1.6330.8690.146
05-1.317-0.3150.6930.003
06-2.171.234-1.366-1.633
07-1.1830.89-2.5260.164
08-0.138-0.981-0.7940.834
09-1.028-0.189-1.0520.902
100.682-0.275-1.4170.02
110.675-0.018-0.613-0.67
120.447-0.480.548-2.425
131.17-1.435-1.064-1.633
14-1.225-1.3661.081-0.687
15-2.3771.077-2.098-0.163
16-1.490.227-3.0840.906
17-2.3771.17-1.04-1.102
180.7630.29-2.17-0.904
19-0.6130.1420.0120.258
20-0.8040.888-1.724-0.058
Standard thresholds
P-value Threshold
0.001 4.48206
0.0005 5.31441
0.0001 7.06966