| Motif | ZN667.H12INVITRO.1.P.D |
| Gene (human) | ZNF667 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf667 |
| Gene synonyms (mouse) | Mip1, Zfp667 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | ZN667.H12INVITRO.1.P.D |
| Gene (human) | ZNF667 (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Znf667 |
| Gene synonyms (mouse) | Mip1, Zfp667 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 10 |
| Consensus | YWMRAGCYCM |
| GC content | 43.86% |
| Information content (bits; total / per base) | 9.833 / 0.983 |
| Data sources | ChIP-Seq |
| Aligned words | 402 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (5) | 0.738 | 0.762 | 0.7 | 0.712 | 0.689 | 0.721 | 2.713 | 2.777 | 61.432 | 74.678 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | Unclassified {2.3.3.0} (TFClass) |
| TFClass ID | TFClass: 2.3.3.0.179 |
| HGNC | HGNC:28854 |
| MGI | MGI:2442757 |
| EntrezGene (human) | GeneID:63934 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:384763 (SSTAR profile) |
| UniProt ID (human) | ZN667_HUMAN |
| UniProt ID (mouse) | ZN667_MOUSE |
| UniProt AC (human) | Q5HYK9 (TFClass) |
| UniProt AC (mouse) | Q2TL60 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN667.H12INVITRO.1.P.D.pcm |
| PWM | ZN667.H12INVITRO.1.P.D.pwm |
| PFM | ZN667.H12INVITRO.1.P.D.pfm |
| Alignment | ZN667.H12INVITRO.1.P.D.words.tsv |
| Threshold to P-value map | ZN667.H12INVITRO.1.P.D.thr |
| Motif in other formats | |
| JASPAR format | ZN667.H12INVITRO.1.P.D_jaspar_format.txt |
| MEME format | ZN667.H12INVITRO.1.P.D_meme_format.meme |
| Transfac format | ZN667.H12INVITRO.1.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 40.25 | 68.25 | 32.25 | 261.25 |
| 02 | 300.25 | 28.25 | 25.25 | 48.25 |
| 03 | 273.25 | 53.25 | 32.25 | 43.25 |
| 04 | 206.25 | 7.25 | 176.25 | 12.25 |
| 05 | 372.25 | 2.25 | 13.25 | 14.25 |
| 06 | 7.25 | 5.25 | 379.25 | 10.25 |
| 07 | 2.25 | 324.25 | 6.25 | 69.25 |
| 08 | 14.25 | 85.25 | 19.25 | 283.25 |
| 09 | 11.0 | 368.0 | 9.0 | 14.0 |
| 10 | 242.0 | 120.0 | 8.0 | 32.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.1 | 0.17 | 0.08 | 0.65 |
| 02 | 0.747 | 0.07 | 0.063 | 0.12 |
| 03 | 0.68 | 0.132 | 0.08 | 0.108 |
| 04 | 0.513 | 0.018 | 0.438 | 0.03 |
| 05 | 0.926 | 0.006 | 0.033 | 0.035 |
| 06 | 0.018 | 0.013 | 0.943 | 0.025 |
| 07 | 0.006 | 0.807 | 0.016 | 0.172 |
| 08 | 0.035 | 0.212 | 0.048 | 0.705 |
| 09 | 0.027 | 0.915 | 0.022 | 0.035 |
| 10 | 0.602 | 0.299 | 0.02 | 0.08 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.893 | -0.38 | -1.106 | 0.946 |
| 02 | 1.085 | -1.232 | -1.338 | -0.718 |
| 03 | 0.991 | -0.622 | -1.106 | -0.824 |
| 04 | 0.711 | -2.456 | 0.555 | -2.004 |
| 05 | 1.299 | -3.303 | -1.934 | -1.868 |
| 06 | -2.456 | -2.716 | 1.317 | -2.161 |
| 07 | -3.303 | 1.161 | -2.577 | -0.366 |
| 08 | -1.868 | -0.162 | -1.592 | 1.027 |
| 09 | -2.099 | 1.287 | -2.274 | -1.884 |
| 10 | 0.87 | 0.175 | -2.374 | -1.113 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.78182 |
| 0.0005 | 5.57305 |
| 0.0001 | 7.23652 |