| Motif | ZN652.H12INVIVO.0.PS.A |
| Gene (human) | ZNF652 (GeneCards) |
| Gene synonyms (human) | KIAA0924 |
| Gene (mouse) | Znf652 |
| Gene synonyms (mouse) | Kiaa0924, Zfp652 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | A |
| Motif | ZN652.H12INVIVO.0.PS.A |
| Gene (human) | ZNF652 (GeneCards) |
| Gene synonyms (human) | KIAA0924 |
| Gene (mouse) | Znf652 |
| Gene synonyms (mouse) | Kiaa0924, Zfp652 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | A |
| Motif length | 11 |
| Consensus | bvRRGGGTTAA |
| GC content | 36.77% |
| Information content (bits; total / per base) | 13.869 / 1.261 |
| Data sources | ChIP-Seq + HT-SELEX |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (7) | 0.958 | 0.966 | 0.931 | 0.946 | 0.951 | 0.957 | 4.805 | 4.916 | 604.495 | 629.509 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 1 experiments | median | 0.593 | 0.6 | 0.543 | 0.551 | 0.522 | 0.53 |
| best | 0.593 | 0.6 | 0.543 | 0.551 | 0.522 | 0.53 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | More than 3 adjacent zinc fingers {2.3.3} (TFClass) |
| TF subfamily | ZNF652-like {2.3.3.29} (TFClass) |
| TFClass ID | TFClass: 2.3.3.29.1 |
| HGNC | HGNC:29147 |
| MGI | MGI:2442221 |
| EntrezGene (human) | GeneID:22834 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:268469 (SSTAR profile) |
| UniProt ID (human) | ZN652_HUMAN |
| UniProt ID (mouse) | ZN652_MOUSE |
| UniProt AC (human) | Q9Y2D9 (TFClass) |
| UniProt AC (mouse) | Q5DU09 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 0 mouse |
| HT-SELEX | 1 |
| Methyl-HT-SELEX | 0 |
| PCM | ZN652.H12INVIVO.0.PS.A.pcm |
| PWM | ZN652.H12INVIVO.0.PS.A.pwm |
| PFM | ZN652.H12INVIVO.0.PS.A.pfm |
| Alignment | ZN652.H12INVIVO.0.PS.A.words.tsv |
| Threshold to P-value map | ZN652.H12INVIVO.0.PS.A.thr |
| Motif in other formats | |
| JASPAR format | ZN652.H12INVIVO.0.PS.A_jaspar_format.txt |
| MEME format | ZN652.H12INVIVO.0.PS.A_meme_format.meme |
| Transfac format | ZN652.H12INVIVO.0.PS.A_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 71.0 | 239.0 | 433.0 | 257.0 |
| 02 | 604.0 | 145.0 | 137.0 | 114.0 |
| 03 | 778.0 | 63.0 | 111.0 | 48.0 |
| 04 | 697.0 | 21.0 | 235.0 | 47.0 |
| 05 | 48.0 | 36.0 | 836.0 | 80.0 |
| 06 | 245.0 | 3.0 | 734.0 | 18.0 |
| 07 | 2.0 | 2.0 | 995.0 | 1.0 |
| 08 | 1.0 | 1.0 | 0.0 | 998.0 |
| 09 | 4.0 | 6.0 | 10.0 | 980.0 |
| 10 | 986.0 | 6.0 | 4.0 | 4.0 |
| 11 | 967.0 | 20.0 | 8.0 | 5.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.071 | 0.239 | 0.433 | 0.257 |
| 02 | 0.604 | 0.145 | 0.137 | 0.114 |
| 03 | 0.778 | 0.063 | 0.111 | 0.048 |
| 04 | 0.697 | 0.021 | 0.235 | 0.047 |
| 05 | 0.048 | 0.036 | 0.836 | 0.08 |
| 06 | 0.245 | 0.003 | 0.734 | 0.018 |
| 07 | 0.002 | 0.002 | 0.995 | 0.001 |
| 08 | 0.001 | 0.001 | 0.0 | 0.998 |
| 09 | 0.004 | 0.006 | 0.01 | 0.98 |
| 10 | 0.986 | 0.006 | 0.004 | 0.004 |
| 11 | 0.967 | 0.02 | 0.008 | 0.005 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.242 | -0.045 | 0.546 | 0.027 |
| 02 | 0.878 | -0.54 | -0.596 | -0.777 |
| 03 | 1.131 | -1.358 | -0.803 | -1.622 |
| 04 | 1.021 | -2.405 | -0.061 | -1.642 |
| 05 | -1.622 | -1.898 | 1.202 | -1.125 |
| 06 | -0.02 | -3.975 | 1.073 | -2.546 |
| 07 | -4.213 | -4.213 | 1.376 | -4.525 |
| 08 | -4.525 | -4.525 | -4.982 | 1.379 |
| 09 | -3.783 | -3.484 | -3.066 | 1.361 |
| 10 | 1.367 | -3.484 | -3.783 | -3.783 |
| 11 | 1.348 | -2.45 | -3.253 | -3.622 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.128315 |
| 0.0005 | 4.35765 |
| 0.0001 | 6.91977 |